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C0LGF5

- Y1341_ARATH

UniProt

C0LGF5 - Y1341_ARATH

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Protein

Probable LRR receptor-like serine/threonine-protein kinase At1g34110

Gene

At1g34110

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli

Functioni

Catalytic activityi

ATP + a protein = ADP + a phosphoprotein.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei800 – 8001ATPPROSITE-ProRule annotation
Active sitei900 – 9001Proton acceptorPROSITE-ProRule annotation

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi778 – 7869ATPPROSITE-ProRule annotation

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. protein serine/threonine kinase activity Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Kinase, Receptor, Serine/threonine-protein kinase, Transferase

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciARA:AT1G34110-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Probable LRR receptor-like serine/threonine-protein kinase At1g34110 (EC:2.7.11.1)
Gene namesi
Ordered Locus Names:At1g34110
ORF Names:F12G12.7
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
ProteomesiUP000006548: Chromosome 1

Organism-specific databases

TAIRiAT1G34110.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Topological domaini22 – 706685ExtracellularSequence AnalysisAdd
BLAST
Transmembranei707 – 72721HelicalSequence AnalysisAdd
BLAST
Topological domaini728 – 1072345CytoplasmicSequence AnalysisAdd
BLAST

GO - Cellular componenti

  1. integral component of membrane Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2121Sequence AnalysisAdd
BLAST
Chaini22 – 10721051Probable LRR receptor-like serine/threonine-protein kinase At1g34110PRO_0000387526Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Glycosylationi80 – 801N-linked (GlcNAc...)Sequence Analysis
Glycosylationi97 – 971N-linked (GlcNAc...)Sequence Analysis
Glycosylationi102 – 1021N-linked (GlcNAc...)Sequence Analysis
Glycosylationi176 – 1761N-linked (GlcNAc...)Sequence Analysis
Glycosylationi213 – 2131N-linked (GlcNAc...)Sequence Analysis
Glycosylationi306 – 3061N-linked (GlcNAc...)Sequence Analysis
Glycosylationi354 – 3541N-linked (GlcNAc...)Sequence Analysis
Glycosylationi402 – 4021N-linked (GlcNAc...)Sequence Analysis
Glycosylationi498 – 4981N-linked (GlcNAc...)Sequence Analysis
Glycosylationi546 – 5461N-linked (GlcNAc...)Sequence Analysis
Glycosylationi650 – 6501N-linked (GlcNAc...)Sequence Analysis
Glycosylationi655 – 6551N-linked (GlcNAc...)Sequence Analysis
Modified residuei764 – 7641PhosphothreonineBy similarity
Modified residuei851 – 8511PhosphotyrosineBy similarity

Keywords - PTMi

Glycoprotein, Phosphoprotein

Proteomic databases

PRIDEiC0LGF5.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT1G34110.1-P.

Structurei

3D structure databases

ProteinModelPortaliC0LGF5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Repeati90 – 11324LRR 1Add
BLAST
Repeati114 – 13825LRR 2Add
BLAST
Repeati140 – 16223LRR 3Add
BLAST
Repeati164 – 18522LRR 4Add
BLAST
Repeati187 – 21125LRR 5Add
BLAST
Repeati212 – 23423LRR 6Add
BLAST
Repeati235 – 25925LRR 7Add
BLAST
Repeati260 – 28324LRR 8Add
BLAST
Repeati285 – 30723LRR 9Add
BLAST
Repeati308 – 33124LRR 10Add
BLAST
Repeati332 – 35524LRR 11Add
BLAST
Repeati356 – 37924LRR 12Add
BLAST
Repeati381 – 40222LRR 13Add
BLAST
Repeati403 – 42725LRR 14Add
BLAST
Repeati429 – 45123LRR 15Add
BLAST
Repeati452 – 47524LRR 16Add
BLAST
Repeati477 – 49923LRR 17Add
BLAST
Repeati500 – 52324LRR 18Add
BLAST
Repeati524 – 54623LRR 19Add
BLAST
Repeati548 – 57124LRR 20Add
BLAST
Repeati572 – 59524LRR 21Add
BLAST
Repeati597 – 61923LRR 22Add
BLAST
Repeati620 – 64223LRR 23Add
BLAST
Repeati643 – 66725LRR 24Add
BLAST
Domaini772 – 1067296Protein kinasePROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.PROSITE-ProRule annotation
Contains 24 LRR (leucine-rich) repeats.Curated
Contains 1 protein kinase domain.PROSITE-ProRule annotation

Keywords - Domaini

Leucine-rich repeat, Repeat, Signal, Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiCOG4886.
HOGENOMiHOG000116551.
InParanoidiC0LGF5.
OMAiWENSISG.
PhylomeDBiC0LGF5.

Family and domain databases

InterProiIPR011009. Kinase-like_dom.
IPR001611. Leu-rich_rpt.
IPR025875. Leu-rich_rpt_4.
IPR013210. LRR-contain_N2.
IPR000719. Prot_kinase_dom.
IPR017441. Protein_kinase_ATP_BS.
IPR008271. Ser/Thr_kinase_AS.
[Graphical view]
PfamiPF00560. LRR_1. 1 hit.
PF12799. LRR_4. 2 hits.
PF08263. LRRNT_2. 1 hit.
PF00069. Pkinase. 1 hit.
[Graphical view]
SUPFAMiSSF56112. SSF56112. 1 hit.
PROSITEiPS51450. LRR. 16 hits.
PS00107. PROTEIN_KINASE_ATP. 1 hit.
PS50011. PROTEIN_KINASE_DOM. 1 hit.
PS00108. PROTEIN_KINASE_ST. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

C0LGF5-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MERERSNFFF LFLFCSWVSM AQPTLSLSSD GQALLSLKRP SPSLFSSWDP
60 70 80 90 100
QDQTPCSWYG ITCSADNRVI SVSIPDTFLN LSSIPDLSSL SSLQFLNLSS
110 120 130 140 150
TNLSGPIPPS FGKLTHLRLL DLSSNSLSGP IPSELGRLST LQFLILNANK
160 170 180 190 200
LSGSIPSQIS NLFALQVLCL QDNLLNGSIP SSFGSLVSLQ QFRLGGNTNL
210 220 230 240 250
GGPIPAQLGF LKNLTTLGFA ASGLSGSIPS TFGNLVNLQT LALYDTEISG
260 270 280 290 300
TIPPQLGLCS ELRNLYLHMN KLTGSIPKEL GKLQKITSLL LWGNSLSGVI
310 320 330 340 350
PPEISNCSSL VVFDVSANDL TGDIPGDLGK LVWLEQLQLS DNMFTGQIPW
360 370 380 390 400
ELSNCSSLIA LQLDKNKLSG SIPSQIGNLK SLQSFFLWEN SISGTIPSSF
410 420 430 440 450
GNCTDLVALD LSRNKLTGRI PEELFSLKRL SKLLLLGNSL SGGLPKSVAK
460 470 480 490 500
CQSLVRLRVG ENQLSGQIPK EIGELQNLVF LDLYMNHFSG GLPYEISNIT
510 520 530 540 550
VLELLDVHNN YITGDIPAQL GNLVNLEQLD LSRNSFTGNI PLSFGNLSYL
560 570 580 590 600
NKLILNNNLL TGQIPKSIKN LQKLTLLDLS YNSLSGEIPQ ELGQVTSLTI
610 620 630 640 650
NLDLSYNTFT GNIPETFSDL TQLQSLDLSS NSLHGDIKVL GSLTSLASLN
660 670 680 690 700
ISCNNFSGPI PSTPFFKTIS TTSYLQNTNL CHSLDGITCS SHTGQNNGVK
710 720 730 740 750
SPKIVALTAV ILASITIAIL AAWLLILRNN HLYKTSQNSS SSPSTAEDFS
760 770 780 790 800
YPWTFIPFQK LGITVNNIVT SLTDENVIGK GCSGIVYKAE IPNGDIVAVK
810 820 830 840 850
KLWKTKDNNE EGESTIDSFA AEIQILGNIR HRNIVKLLGY CSNKSVKLLL
860 870 880 890 900
YNYFPNGNLQ QLLQGNRNLD WETRYKIAIG AAQGLAYLHH DCVPAILHRD
910 920 930 940 950
VKCNNILLDS KYEAILADFG LAKLMMNSPN YHNAMSRVAG SYGYIAPEYG
960 970 980 990 1000
YTMNITEKSD VYSYGVVLLE ILSGRSAVEP QIGDGLHIVE WVKKKMGTFE
1010 1020 1030 1040 1050
PALSVLDVKL QGLPDQIVQE MLQTLGIAMF CVNPSPVERP TMKEVVTLLM
1060 1070
EVKCSPEEWG KTSQPLIKPS SS
Length:1,072
Mass (Da):116,725
Last modified:November 3, 2009 - v2
Checksum:i3A5348584E41C766
GO

Sequence cautioni

The sequence AAG12526.1 differs from that shown. Reason: Erroneous gene model prediction. Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC015446 Genomic DNA. Translation: AAG12526.1. Sequence problems.
CP002684 Genomic DNA. Translation: AEE31671.1.
FJ708644 mRNA. Translation: ACN59240.1.
PIRiB86465.
RefSeqiNP_174673.3. NM_103134.3.
UniGeneiAt.16189.
At.64854.

Genome annotation databases

EnsemblPlantsiAT1G34110.1; AT1G34110.1; AT1G34110.
GeneIDi840310.
KEGGiath:AT1G34110.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC015446 Genomic DNA. Translation: AAG12526.1 . Sequence problems.
CP002684 Genomic DNA. Translation: AEE31671.1 .
FJ708644 mRNA. Translation: ACN59240.1 .
PIRi B86465.
RefSeqi NP_174673.3. NM_103134.3.
UniGenei At.16189.
At.64854.

3D structure databases

ProteinModelPortali C0LGF5.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 3702.AT1G34110.1-P.

Proteomic databases

PRIDEi C0LGF5.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi AT1G34110.1 ; AT1G34110.1 ; AT1G34110 .
GeneIDi 840310.
KEGGi ath:AT1G34110.

Organism-specific databases

GeneFarmi 622. 55.
TAIRi AT1G34110.

Phylogenomic databases

eggNOGi COG4886.
HOGENOMi HOG000116551.
InParanoidi C0LGF5.
OMAi WENSISG.
PhylomeDBi C0LGF5.

Enzyme and pathway databases

BioCyci ARA:AT1G34110-MONOMER.

Family and domain databases

InterProi IPR011009. Kinase-like_dom.
IPR001611. Leu-rich_rpt.
IPR025875. Leu-rich_rpt_4.
IPR013210. LRR-contain_N2.
IPR000719. Prot_kinase_dom.
IPR017441. Protein_kinase_ATP_BS.
IPR008271. Ser/Thr_kinase_AS.
[Graphical view ]
Pfami PF00560. LRR_1. 1 hit.
PF12799. LRR_4. 2 hits.
PF08263. LRRNT_2. 1 hit.
PF00069. Pkinase. 1 hit.
[Graphical view ]
SUPFAMi SSF56112. SSF56112. 1 hit.
PROSITEi PS51450. LRR. 16 hits.
PS00107. PROTEIN_KINASE_ATP. 1 hit.
PS50011. PROTEIN_KINASE_DOM. 1 hit.
PS00108. PROTEIN_KINASE_ST. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana."
    Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K.
    , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W.
    Nature 408:816-820(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  2. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. Columbia.
  3. "Genome-wide cloning and sequence analysis of leucine-rich repeat receptor-like protein kinase genes in Arabidopsis thaliana."
    Gou X., He K., Yang H., Yuan T., Lin H., Clouse S.D., Li J.
    BMC Genomics 11:19-19(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 20-1072.
    Strain: cv. Columbia.

Entry informationi

Entry nameiY1341_ARATH
AccessioniPrimary (citable) accession number: C0LGF5
Secondary accession number(s): Q9FX19
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 3, 2009
Last sequence update: November 3, 2009
Last modified: October 29, 2014
This is version 48 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3