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Protein

Probable LRR receptor-like serine/threonine-protein kinase At1g34110

Gene

At1g34110

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at transcript leveli

Functioni

Catalytic activityi

ATP + a protein = ADP + a phosphoprotein.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Binding sitei800ATPPROSITE-ProRule annotation1
Active sitei900Proton acceptorPROSITE-ProRule annotation1

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi778 – 786ATPPROSITE-ProRule annotation9

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

Kinase, Receptor, Serine/threonine-protein kinase, Transferase

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Probable LRR receptor-like serine/threonine-protein kinase At1g34110 (EC:2.7.11.1)
Gene namesi
Ordered Locus Names:At1g34110
ORF Names:F12G12.7
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 1

Organism-specific databases

TAIRiAT1G34110.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Topological domaini22 – 706ExtracellularSequence analysisAdd BLAST685
Transmembranei707 – 727HelicalSequence analysisAdd BLAST21
Topological domaini728 – 1072CytoplasmicSequence analysisAdd BLAST345

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 21Sequence analysisAdd BLAST21
ChainiPRO_000038752622 – 1072Probable LRR receptor-like serine/threonine-protein kinase At1g34110Add BLAST1051

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Glycosylationi80N-linked (GlcNAc...)Sequence analysis1
Glycosylationi97N-linked (GlcNAc...)Sequence analysis1
Glycosylationi102N-linked (GlcNAc...)Sequence analysis1
Glycosylationi176N-linked (GlcNAc...)Sequence analysis1
Glycosylationi213N-linked (GlcNAc...)Sequence analysis1
Glycosylationi306N-linked (GlcNAc...)Sequence analysis1
Glycosylationi354N-linked (GlcNAc...)Sequence analysis1
Glycosylationi402N-linked (GlcNAc...)Sequence analysis1
Glycosylationi498N-linked (GlcNAc...)Sequence analysis1
Glycosylationi546N-linked (GlcNAc...)Sequence analysis1
Glycosylationi650N-linked (GlcNAc...)Sequence analysis1
Glycosylationi655N-linked (GlcNAc...)Sequence analysis1
Modified residuei764PhosphothreonineBy similarity1
Modified residuei851PhosphotyrosineBy similarity1
Modified residuei887PhosphotyrosineBy similarity1
Modified residuei936PhosphoserineBy similarity1
Modified residuei944PhosphotyrosineBy similarity1
Modified residuei951PhosphotyrosineBy similarity1
Modified residuei952PhosphothreonineBy similarity1

Keywords - PTMi

Glycoprotein, Phosphoprotein

Proteomic databases

PaxDbiC0LGF5.
PRIDEiC0LGF5.

Expressioni

Gene expression databases

GenevisibleiC0LGF5. AT.

Interactioni

Protein-protein interaction databases

BioGridi25542. 7 interactors.
STRINGi3702.AT1G34110.1.

Structurei

3D structure databases

ProteinModelPortaliC0LGF5.
SMRiC0LGF5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Repeati90 – 113LRR 1Add BLAST24
Repeati114 – 138LRR 2Add BLAST25
Repeati140 – 162LRR 3Add BLAST23
Repeati164 – 185LRR 4Add BLAST22
Repeati187 – 211LRR 5Add BLAST25
Repeati212 – 234LRR 6Add BLAST23
Repeati235 – 259LRR 7Add BLAST25
Repeati260 – 283LRR 8Add BLAST24
Repeati285 – 307LRR 9Add BLAST23
Repeati308 – 331LRR 10Add BLAST24
Repeati332 – 355LRR 11Add BLAST24
Repeati356 – 379LRR 12Add BLAST24
Repeati381 – 402LRR 13Add BLAST22
Repeati403 – 427LRR 14Add BLAST25
Repeati429 – 451LRR 15Add BLAST23
Repeati452 – 475LRR 16Add BLAST24
Repeati477 – 499LRR 17Add BLAST23
Repeati500 – 523LRR 18Add BLAST24
Repeati524 – 546LRR 19Add BLAST23
Repeati548 – 571LRR 20Add BLAST24
Repeati572 – 595LRR 21Add BLAST24
Repeati597 – 619LRR 22Add BLAST23
Repeati620 – 642LRR 23Add BLAST23
Repeati643 – 667LRR 24Add BLAST25
Domaini772 – 1067Protein kinasePROSITE-ProRule annotationAdd BLAST296

Sequence similaritiesi

Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.PROSITE-ProRule annotation
Contains 24 LRR (leucine-rich) repeats.Curated
Contains 1 protein kinase domain.PROSITE-ProRule annotation

Keywords - Domaini

Leucine-rich repeat, Repeat, Signal, Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG410IF73. Eukaryota.
COG4886. LUCA.
HOGENOMiHOG000116551.
InParanoidiC0LGF5.
OMAiCKNHTAS.
OrthoDBiEOG093601ED.
PhylomeDBiC0LGF5.

Family and domain databases

Gene3Di3.80.10.10. 3 hits.
InterProiIPR011009. Kinase-like_dom.
IPR032675. L_dom-like.
IPR001611. Leu-rich_rpt.
IPR003591. Leu-rich_rpt_typical-subtyp.
IPR013210. LRR_N_plant-typ.
IPR000719. Prot_kinase_dom.
IPR017441. Protein_kinase_ATP_BS.
IPR008271. Ser/Thr_kinase_AS.
[Graphical view]
PfamiPF00560. LRR_1. 1 hit.
PF13855. LRR_8. 2 hits.
PF08263. LRRNT_2. 1 hit.
PF00069. Pkinase. 1 hit.
[Graphical view]
SMARTiSM00369. LRR_TYP. 10 hits.
SM00220. S_TKc. 1 hit.
[Graphical view]
SUPFAMiSSF52058. SSF52058. 2 hits.
SSF56112. SSF56112. 1 hit.
PROSITEiPS51450. LRR. 16 hits.
PS00107. PROTEIN_KINASE_ATP. 1 hit.
PS50011. PROTEIN_KINASE_DOM. 1 hit.
PS00108. PROTEIN_KINASE_ST. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

C0LGF5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MERERSNFFF LFLFCSWVSM AQPTLSLSSD GQALLSLKRP SPSLFSSWDP
60 70 80 90 100
QDQTPCSWYG ITCSADNRVI SVSIPDTFLN LSSIPDLSSL SSLQFLNLSS
110 120 130 140 150
TNLSGPIPPS FGKLTHLRLL DLSSNSLSGP IPSELGRLST LQFLILNANK
160 170 180 190 200
LSGSIPSQIS NLFALQVLCL QDNLLNGSIP SSFGSLVSLQ QFRLGGNTNL
210 220 230 240 250
GGPIPAQLGF LKNLTTLGFA ASGLSGSIPS TFGNLVNLQT LALYDTEISG
260 270 280 290 300
TIPPQLGLCS ELRNLYLHMN KLTGSIPKEL GKLQKITSLL LWGNSLSGVI
310 320 330 340 350
PPEISNCSSL VVFDVSANDL TGDIPGDLGK LVWLEQLQLS DNMFTGQIPW
360 370 380 390 400
ELSNCSSLIA LQLDKNKLSG SIPSQIGNLK SLQSFFLWEN SISGTIPSSF
410 420 430 440 450
GNCTDLVALD LSRNKLTGRI PEELFSLKRL SKLLLLGNSL SGGLPKSVAK
460 470 480 490 500
CQSLVRLRVG ENQLSGQIPK EIGELQNLVF LDLYMNHFSG GLPYEISNIT
510 520 530 540 550
VLELLDVHNN YITGDIPAQL GNLVNLEQLD LSRNSFTGNI PLSFGNLSYL
560 570 580 590 600
NKLILNNNLL TGQIPKSIKN LQKLTLLDLS YNSLSGEIPQ ELGQVTSLTI
610 620 630 640 650
NLDLSYNTFT GNIPETFSDL TQLQSLDLSS NSLHGDIKVL GSLTSLASLN
660 670 680 690 700
ISCNNFSGPI PSTPFFKTIS TTSYLQNTNL CHSLDGITCS SHTGQNNGVK
710 720 730 740 750
SPKIVALTAV ILASITIAIL AAWLLILRNN HLYKTSQNSS SSPSTAEDFS
760 770 780 790 800
YPWTFIPFQK LGITVNNIVT SLTDENVIGK GCSGIVYKAE IPNGDIVAVK
810 820 830 840 850
KLWKTKDNNE EGESTIDSFA AEIQILGNIR HRNIVKLLGY CSNKSVKLLL
860 870 880 890 900
YNYFPNGNLQ QLLQGNRNLD WETRYKIAIG AAQGLAYLHH DCVPAILHRD
910 920 930 940 950
VKCNNILLDS KYEAILADFG LAKLMMNSPN YHNAMSRVAG SYGYIAPEYG
960 970 980 990 1000
YTMNITEKSD VYSYGVVLLE ILSGRSAVEP QIGDGLHIVE WVKKKMGTFE
1010 1020 1030 1040 1050
PALSVLDVKL QGLPDQIVQE MLQTLGIAMF CVNPSPVERP TMKEVVTLLM
1060 1070
EVKCSPEEWG KTSQPLIKPS SS
Length:1,072
Mass (Da):116,725
Last modified:November 3, 2009 - v2
Checksum:i3A5348584E41C766
GO

Sequence cautioni

The sequence AAG12526 differs from that shown. Reason: Erroneous gene model prediction.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC015446 Genomic DNA. Translation: AAG12526.1. Sequence problems.
CP002684 Genomic DNA. Translation: AEE31671.1.
FJ708644 mRNA. Translation: ACN59240.1.
PIRiB86465.
RefSeqiNP_174673.3. NM_103134.4.
UniGeneiAt.16189.
At.64854.

Genome annotation databases

EnsemblPlantsiAT1G34110.1; AT1G34110.1; AT1G34110.
GeneIDi840310.
GrameneiAT1G34110.1; AT1G34110.1; AT1G34110.
KEGGiath:AT1G34110.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC015446 Genomic DNA. Translation: AAG12526.1. Sequence problems.
CP002684 Genomic DNA. Translation: AEE31671.1.
FJ708644 mRNA. Translation: ACN59240.1.
PIRiB86465.
RefSeqiNP_174673.3. NM_103134.4.
UniGeneiAt.16189.
At.64854.

3D structure databases

ProteinModelPortaliC0LGF5.
SMRiC0LGF5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi25542. 7 interactors.
STRINGi3702.AT1G34110.1.

Proteomic databases

PaxDbiC0LGF5.
PRIDEiC0LGF5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT1G34110.1; AT1G34110.1; AT1G34110.
GeneIDi840310.
GrameneiAT1G34110.1; AT1G34110.1; AT1G34110.
KEGGiath:AT1G34110.

Organism-specific databases

TAIRiAT1G34110.

Phylogenomic databases

eggNOGiENOG410IF73. Eukaryota.
COG4886. LUCA.
HOGENOMiHOG000116551.
InParanoidiC0LGF5.
OMAiCKNHTAS.
OrthoDBiEOG093601ED.
PhylomeDBiC0LGF5.

Miscellaneous databases

PROiC0LGF5.

Gene expression databases

GenevisibleiC0LGF5. AT.

Family and domain databases

Gene3Di3.80.10.10. 3 hits.
InterProiIPR011009. Kinase-like_dom.
IPR032675. L_dom-like.
IPR001611. Leu-rich_rpt.
IPR003591. Leu-rich_rpt_typical-subtyp.
IPR013210. LRR_N_plant-typ.
IPR000719. Prot_kinase_dom.
IPR017441. Protein_kinase_ATP_BS.
IPR008271. Ser/Thr_kinase_AS.
[Graphical view]
PfamiPF00560. LRR_1. 1 hit.
PF13855. LRR_8. 2 hits.
PF08263. LRRNT_2. 1 hit.
PF00069. Pkinase. 1 hit.
[Graphical view]
SMARTiSM00369. LRR_TYP. 10 hits.
SM00220. S_TKc. 1 hit.
[Graphical view]
SUPFAMiSSF52058. SSF52058. 2 hits.
SSF56112. SSF56112. 1 hit.
PROSITEiPS51450. LRR. 16 hits.
PS00107. PROTEIN_KINASE_ATP. 1 hit.
PS50011. PROTEIN_KINASE_DOM. 1 hit.
PS00108. PROTEIN_KINASE_ST. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiY1341_ARATH
AccessioniPrimary (citable) accession number: C0LGF5
Secondary accession number(s): Q9FX19
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 3, 2009
Last sequence update: November 3, 2009
Last modified: November 30, 2016
This is version 63 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.