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C0LGF5

- Y1341_ARATH

UniProt

C0LGF5 - Y1341_ARATH

Protein

Probable LRR receptor-like serine/threonine-protein kinase At1g34110

Gene

At1g34110

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 47 (01 Oct 2014)
      Sequence version 2 (03 Nov 2009)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    ATP + a protein = ADP + a phosphoprotein.

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Binding sitei800 – 8001ATPPROSITE-ProRule annotation
    Active sitei900 – 9001Proton acceptorPROSITE-ProRule annotation

    Regions

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Nucleotide bindingi778 – 7869ATPPROSITE-ProRule annotation

    GO - Molecular functioni

    1. ATP binding Source: UniProtKB-KW
    2. protein serine/threonine kinase activity Source: UniProtKB-KW

    Keywords - Molecular functioni

    Kinase, Receptor, Serine/threonine-protein kinase, Transferase

    Keywords - Ligandi

    ATP-binding, Nucleotide-binding

    Enzyme and pathway databases

    BioCyciARA:AT1G34110-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Probable LRR receptor-like serine/threonine-protein kinase At1g34110 (EC:2.7.11.1)
    Gene namesi
    Ordered Locus Names:At1g34110
    ORF Names:F12G12.7
    OrganismiArabidopsis thaliana (Mouse-ear cress)
    Taxonomic identifieri3702 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
    ProteomesiUP000006548: Chromosome 1

    Organism-specific databases

    TAIRiAT1G34110.

    Subcellular locationi

    GO - Cellular componenti

    1. integral component of membrane Source: UniProtKB-KW

    Keywords - Cellular componenti

    Membrane

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 2121Sequence AnalysisAdd
    BLAST
    Chaini22 – 10721051Probable LRR receptor-like serine/threonine-protein kinase At1g34110PRO_0000387526Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Glycosylationi80 – 801N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi97 – 971N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi102 – 1021N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi176 – 1761N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi213 – 2131N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi306 – 3061N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi354 – 3541N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi402 – 4021N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi498 – 4981N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi546 – 5461N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi650 – 6501N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi655 – 6551N-linked (GlcNAc...)Sequence Analysis
    Modified residuei764 – 7641PhosphothreonineBy similarity
    Modified residuei851 – 8511PhosphotyrosineBy similarity

    Keywords - PTMi

    Glycoprotein, Phosphoprotein

    Proteomic databases

    PRIDEiC0LGF5.

    Interactioni

    Protein-protein interaction databases

    STRINGi3702.AT1G34110.1-P.

    Structurei

    3D structure databases

    ProteinModelPortaliC0LGF5.
    ModBaseiSearch...
    MobiDBiSearch...

    Topological domain

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Topological domaini22 – 706685ExtracellularSequence AnalysisAdd
    BLAST
    Topological domaini728 – 1072345CytoplasmicSequence AnalysisAdd
    BLAST

    Transmembrane

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Transmembranei707 – 72721HelicalSequence AnalysisAdd
    BLAST

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Repeati90 – 11324LRR 1Add
    BLAST
    Repeati114 – 13825LRR 2Add
    BLAST
    Repeati140 – 16223LRR 3Add
    BLAST
    Repeati164 – 18522LRR 4Add
    BLAST
    Repeati187 – 21125LRR 5Add
    BLAST
    Repeati212 – 23423LRR 6Add
    BLAST
    Repeati235 – 25925LRR 7Add
    BLAST
    Repeati260 – 28324LRR 8Add
    BLAST
    Repeati285 – 30723LRR 9Add
    BLAST
    Repeati308 – 33124LRR 10Add
    BLAST
    Repeati332 – 35524LRR 11Add
    BLAST
    Repeati356 – 37924LRR 12Add
    BLAST
    Repeati381 – 40222LRR 13Add
    BLAST
    Repeati403 – 42725LRR 14Add
    BLAST
    Repeati429 – 45123LRR 15Add
    BLAST
    Repeati452 – 47524LRR 16Add
    BLAST
    Repeati477 – 49923LRR 17Add
    BLAST
    Repeati500 – 52324LRR 18Add
    BLAST
    Repeati524 – 54623LRR 19Add
    BLAST
    Repeati548 – 57124LRR 20Add
    BLAST
    Repeati572 – 59524LRR 21Add
    BLAST
    Repeati597 – 61923LRR 22Add
    BLAST
    Repeati620 – 64223LRR 23Add
    BLAST
    Repeati643 – 66725LRR 24Add
    BLAST
    Domaini772 – 1067296Protein kinasePROSITE-ProRule annotationAdd
    BLAST

    Sequence similaritiesi

    Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.PROSITE-ProRule annotation
    Contains 24 LRR (leucine-rich) repeats.Curated
    Contains 1 protein kinase domain.PROSITE-ProRule annotation

    Keywords - Domaini

    Leucine-rich repeat, Repeat, Signal, Transmembrane, Transmembrane helix

    Phylogenomic databases

    eggNOGiCOG4886.
    HOGENOMiHOG000116551.
    InParanoidiQ9FX19.
    OMAiWENSISG.
    PhylomeDBiC0LGF5.

    Family and domain databases

    InterProiIPR011009. Kinase-like_dom.
    IPR001611. Leu-rich_rpt.
    IPR025875. Leu-rich_rpt_4.
    IPR013210. LRR-contain_N2.
    IPR000719. Prot_kinase_dom.
    IPR017441. Protein_kinase_ATP_BS.
    IPR008271. Ser/Thr_kinase_AS.
    [Graphical view]
    PfamiPF00560. LRR_1. 1 hit.
    PF12799. LRR_4. 2 hits.
    PF08263. LRRNT_2. 1 hit.
    PF00069. Pkinase. 1 hit.
    [Graphical view]
    SUPFAMiSSF56112. SSF56112. 1 hit.
    PROSITEiPS51450. LRR. 16 hits.
    PS00107. PROTEIN_KINASE_ATP. 1 hit.
    PS50011. PROTEIN_KINASE_DOM. 1 hit.
    PS00108. PROTEIN_KINASE_ST. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    C0LGF5-1 [UniParc]FASTAAdd to Basket

    « Hide

    MERERSNFFF LFLFCSWVSM AQPTLSLSSD GQALLSLKRP SPSLFSSWDP     50
    QDQTPCSWYG ITCSADNRVI SVSIPDTFLN LSSIPDLSSL SSLQFLNLSS 100
    TNLSGPIPPS FGKLTHLRLL DLSSNSLSGP IPSELGRLST LQFLILNANK 150
    LSGSIPSQIS NLFALQVLCL QDNLLNGSIP SSFGSLVSLQ QFRLGGNTNL 200
    GGPIPAQLGF LKNLTTLGFA ASGLSGSIPS TFGNLVNLQT LALYDTEISG 250
    TIPPQLGLCS ELRNLYLHMN KLTGSIPKEL GKLQKITSLL LWGNSLSGVI 300
    PPEISNCSSL VVFDVSANDL TGDIPGDLGK LVWLEQLQLS DNMFTGQIPW 350
    ELSNCSSLIA LQLDKNKLSG SIPSQIGNLK SLQSFFLWEN SISGTIPSSF 400
    GNCTDLVALD LSRNKLTGRI PEELFSLKRL SKLLLLGNSL SGGLPKSVAK 450
    CQSLVRLRVG ENQLSGQIPK EIGELQNLVF LDLYMNHFSG GLPYEISNIT 500
    VLELLDVHNN YITGDIPAQL GNLVNLEQLD LSRNSFTGNI PLSFGNLSYL 550
    NKLILNNNLL TGQIPKSIKN LQKLTLLDLS YNSLSGEIPQ ELGQVTSLTI 600
    NLDLSYNTFT GNIPETFSDL TQLQSLDLSS NSLHGDIKVL GSLTSLASLN 650
    ISCNNFSGPI PSTPFFKTIS TTSYLQNTNL CHSLDGITCS SHTGQNNGVK 700
    SPKIVALTAV ILASITIAIL AAWLLILRNN HLYKTSQNSS SSPSTAEDFS 750
    YPWTFIPFQK LGITVNNIVT SLTDENVIGK GCSGIVYKAE IPNGDIVAVK 800
    KLWKTKDNNE EGESTIDSFA AEIQILGNIR HRNIVKLLGY CSNKSVKLLL 850
    YNYFPNGNLQ QLLQGNRNLD WETRYKIAIG AAQGLAYLHH DCVPAILHRD 900
    VKCNNILLDS KYEAILADFG LAKLMMNSPN YHNAMSRVAG SYGYIAPEYG 950
    YTMNITEKSD VYSYGVVLLE ILSGRSAVEP QIGDGLHIVE WVKKKMGTFE 1000
    PALSVLDVKL QGLPDQIVQE MLQTLGIAMF CVNPSPVERP TMKEVVTLLM 1050
    EVKCSPEEWG KTSQPLIKPS SS 1072
    Length:1,072
    Mass (Da):116,725
    Last modified:November 3, 2009 - v2
    Checksum:i3A5348584E41C766
    GO

    Sequence cautioni

    The sequence AAG12526.1 differs from that shown. Reason: Erroneous gene model prediction.

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC015446 Genomic DNA. Translation: AAG12526.1. Sequence problems.
    CP002684 Genomic DNA. Translation: AEE31671.1.
    FJ708644 mRNA. Translation: ACN59240.1.
    PIRiB86465.
    RefSeqiNP_174673.3. NM_103134.3.
    UniGeneiAt.16189.
    At.64854.

    Genome annotation databases

    EnsemblPlantsiAT1G34110.1; AT1G34110.1; AT1G34110.
    GeneIDi840310.
    KEGGiath:AT1G34110.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC015446 Genomic DNA. Translation: AAG12526.1 . Sequence problems.
    CP002684 Genomic DNA. Translation: AEE31671.1 .
    FJ708644 mRNA. Translation: ACN59240.1 .
    PIRi B86465.
    RefSeqi NP_174673.3. NM_103134.3.
    UniGenei At.16189.
    At.64854.

    3D structure databases

    ProteinModelPortali C0LGF5.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 3702.AT1G34110.1-P.

    Proteomic databases

    PRIDEi C0LGF5.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi AT1G34110.1 ; AT1G34110.1 ; AT1G34110 .
    GeneIDi 840310.
    KEGGi ath:AT1G34110.

    Organism-specific databases

    GeneFarmi 622. 55.
    TAIRi AT1G34110.

    Phylogenomic databases

    eggNOGi COG4886.
    HOGENOMi HOG000116551.
    InParanoidi Q9FX19.
    OMAi WENSISG.
    PhylomeDBi C0LGF5.

    Enzyme and pathway databases

    BioCyci ARA:AT1G34110-MONOMER.

    Family and domain databases

    InterProi IPR011009. Kinase-like_dom.
    IPR001611. Leu-rich_rpt.
    IPR025875. Leu-rich_rpt_4.
    IPR013210. LRR-contain_N2.
    IPR000719. Prot_kinase_dom.
    IPR017441. Protein_kinase_ATP_BS.
    IPR008271. Ser/Thr_kinase_AS.
    [Graphical view ]
    Pfami PF00560. LRR_1. 1 hit.
    PF12799. LRR_4. 2 hits.
    PF08263. LRRNT_2. 1 hit.
    PF00069. Pkinase. 1 hit.
    [Graphical view ]
    SUPFAMi SSF56112. SSF56112. 1 hit.
    PROSITEi PS51450. LRR. 16 hits.
    PS00107. PROTEIN_KINASE_ATP. 1 hit.
    PS50011. PROTEIN_KINASE_DOM. 1 hit.
    PS00108. PROTEIN_KINASE_ST. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana."
      Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K.
      , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W.
      Nature 408:816-820(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Columbia.
    2. The Arabidopsis Information Resource (TAIR)
      Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: GENOME REANNOTATION.
      Strain: cv. Columbia.
    3. "Genome-wide cloning and sequence analysis of leucine-rich repeat receptor-like protein kinase genes in Arabidopsis thaliana."
      Gou X., He K., Yang H., Yuan T., Lin H., Clouse S.D., Li J.
      BMC Genomics 11:19-19(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 20-1072.
      Strain: cv. Columbia.

    Entry informationi

    Entry nameiY1341_ARATH
    AccessioniPrimary (citable) accession number: C0LGF5
    Secondary accession number(s): Q9FX19
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 3, 2009
    Last sequence update: November 3, 2009
    Last modified: October 1, 2014
    This is version 47 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Arabidopsis thaliana
      Arabidopsis thaliana: entries and gene names
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3