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C0IVR9 (C0IVR9_BETPN) Unreviewed, UniProtKB/TrEMBL

Last modified March 6, 2013. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length150 AA.
Sequence statusFragment.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the BetVI family. RuleBase RU000409

Ontologies

Keywords
   Biological processPlant defense
   Molecular functionPathogenesis-related protein RuleBase RU000409
Gene Ontology (GO)
   Biological_processdefense response

Inferred from electronic annotation. Source: UniProtKB-KW

response to biotic stimulus

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL ACF75009.1
Non-terminal residue1501 EMBL ACF75009.1

Sequences

Sequence LengthMass (Da)Tools
C0IVR9 [UniParc].

Last modified May 5, 2009. Version 1.
Checksum: 725F6430505C468B

FASTA15016,506
        10         20         30         40         50         60 
FNYEIEATSV IPAARLFKAF ILDGDNLFPK VAPQAISSVE NIEGNGGPGT IKKISFPEGF 

        70         80         90        100        110        120 
PFKYVKDRVD EVDHTNFKYS YSVIEGGPVG DTLEKISNEI KIVATPNGGS ILKINNKYHT 

       130        140        150 
KGDHEVKAEQ IKASKEMGET LLRAVESYLL 

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References

[1]Schenk M., Cordewener J., America T., van't Westende W., Smulders R., Gilissen L.
Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[2]"Characterization of PR-10 genes from eight Betula species and detection of Bet v 1 isoforms in birch pollen."
Schenk M.F., Cordewener J.H., America A.H., van 't Westende W.P., Smulders M.J., Gilissen L.J.
BMC Plant Biol. 9:24-24(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
EU526164 Genomic DNA. Translation: ACF75009.1.

3D structure databases

ModBaseSearch...

Protein family/group databases

Allergome89. Bet v 1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

Gene3D3.30.530.20. 1 hit.
InterProIPR024949. Bet_v_I_allergen.
IPR000916. Bet_v_I_dom.
IPR023393. START-like_dom.
[Graphical view]
PfamPF00407. Bet_v_1. 1 hit.
[Graphical view]
PRINTSPR00634. BETALLERGEN.
PROSITEPS00451. PATHOGENESIS_BETVI. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC0IVR9_BETPN
AccessionPrimary (citable) accession number: C0IVR9
Entry history
Integrated into UniProtKB/TrEMBL: May 5, 2009
Last sequence update: May 5, 2009
Last modified: March 6, 2013
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)