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C0IR59 (C0IR59_BABDI) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 9. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
OrganismBabesia divergens EMBL ACC96234.2
Taxonomic identifier32595 [NCBI]
Taxonomic lineageEukaryotaAlveolataApicomplexaAconoidasidaPiroplasmidaBabesiidaeBabesia

Protein attributes

Sequence length606 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Ontologies

Keywords
   LigandCalcium PDB 4APM
Metal-binding PDB 4APM
   Technical term3D-structure PDB 4APM
Gene Ontology (GO)
   Biological_processpathogenesis

Inferred from electronic annotation. Source: InterPro

   Cellular_componentmembrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionmetal ion binding

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Metal binding2071Calcium; via carbonyl oxygen PDB 4APM
Metal binding2091Calcium PDB 4APM
Binding site4911Acetate 3 PDB 4APM

Sequences

Sequence LengthMass (Da)Tools
C0IR59 [UniParc].

Last modified May 1, 2013. Version 2.
Checksum: E49CB1D77C90F15D

FASTA60667,556
        10         20         30         40         50         60 
MEATTTAKTG IWKKYLTLVV PILCVVILSG EVVPTEAAFH IRENEPKRRT SRRDGGRSSR 

        70         80         90        100        110        120 
RQTTNSRLSA DDDDSDDGDD SDRPRGRQQS SKSTPKDIWG RYMAKFDLAK SHGSGIYVDL 

       130        140        150        160        170        180 
GGTERVGATQ HRMPTGKCPV MGKVINLGNN ADFLNRISAE NPQDRGLAFP DTAVAVTRNS 

       190        200        210        220        230        240 
NARNRAAAEK TEIILSPVSA ADLVRWGYDG NDVANCAEYA GNIIPASDTA TKYRYPCVYD 

       250        260        270        280        290        300 
AKEEMCHILF TPMQYNRGSR YCDNDGSQDE GTSSLLCMEP MKSGIDAHLY YGSSRVDKKW 

       310        320        330        340        350        360 
EENCPMYPVK DAIFGRGANG SCVAIESAFE EFTRDAEECS ALMFENAAAD LEIDEEADNF 

       370        380        390        400        410        420 
DELKTLSDGL RNIKASKIAQ ALFSPIAKAG TSAKNSKGVG MNWANYDSNT GLCRVIEETP 

       430        440        450        460        470        480 
NCLIIDAGSF AMTAVGSPLE QDAVPFPCDI VTNGYIEPRP RSRHRNTTPI FEVTTALSRE 

       490        500        510        520        530        540 
ALKCSKYVHE KYSESCGTYY YCSEEKPSSW AFWRNLDWKR VAKYVMSLIA IAILYMAIHW 

       550        560        570        580        590        600 
TYKRLWTTKA KPESDEYERF MSKYDYDEGI HTKGHMDQQL RSDAYVWGEA AARPSDVTPV 


HLSKVQ 

« Hide

References

[1]"Babesia divergens apical membrane antigen 1 and its interaction with the human red blood cell."
Montero E., Rodriguez M., Oksov Y., Lobo C.A.
Infect. Immun. 77:4783-4793(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[2]"Babesia divergens and Neospora caninum apical membrane antigen 1 structures reveal selectivity and plasticity in apicomplexan parasite host cell invasion."
Tonkin M.L., Crawford J., Lebrun M.L., Boulanger M.J.
Protein Sci. 22:114-127(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (2.30 ANGSTROMS) OF 93-517 IN COMPLEX WITH ACETATE AND CALCIUM.
[3]Montero E., Lobo C.A.
Submitted (FEB-2013) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
EU486539 mRNA. Translation: ACC96234.2.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
4APMX-ray2.30A93-517[»]
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

InterProIPR003298. Apmem_Ag1.
[Graphical view]
PfamPF02430. AMA-1. 1 hit.
[Graphical view]
PRINTSPR01361. MEROZOITESA.
SMARTSM00815. AMA-1. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC0IR59_BABDI
AccessionPrimary (citable) accession number: C0IR59
Entry history
Integrated into UniProtKB/TrEMBL: May 5, 2009
Last sequence update: May 1, 2013
Last modified: June 11, 2014
This is version 9 of the entry and version 2 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)