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C0H434

- YOKU_BACSU

UniProt

C0H434 - YOKU_BACSU

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Protein
Uncharacterized protein YokU
Gene
yokU, BSU19689
Organism
Bacillus subtilis (strain 168)
Status
Reviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciBSUB:BSU19689-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YokU
Gene namesi
Name:yokU
Ordered Locus Names:BSU19689
OrganismiBacillus subtilis (strain 168)
Taxonomic identifieri224308 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
ProteomesiUP000001570: Chromosome

Organism-specific databases

GenoListiBSU19689.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 9292Uncharacterized protein YokU
PRO_0000380080Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi224308.BSU19689.

Family & Domainsi

Phylogenomic databases

eggNOGiNOG287725.
HOGENOMiHOG000089710.
OrthoDBiEOG6NKR3C.

Family and domain databases

InterProiIPR022451. CHP03829_YokU.
IPR022453. Znf_YgiT-type.
[Graphical view]
TIGRFAMsiTIGR03831. YgiT_finger. 1 hit.
TIGR03829. YokU_near_AblA. 1 hit.

Sequencei

Sequence statusi: Complete.

C0H434-1 [UniParc]FASTAAdd to Basket

« Hide

MKTCEWCGEL EAVPGRNTVY WELPDGTRAI ELTDTPAMVC SSCGMTYQEE   50
NTVKEIEDQL LLIQTKKLPE SLTYQQLMET ERILKRNYFD FS 92
Length:92
Mass (Da):10,703
Last modified:May 5, 2009 - v1
Checksum:i940C052312DBA37E
GO

Sequence cautioni

The sequence AAB81160.1 differs from that shown. Reason: Erroneous initiation.

Sequence conflict

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti46 – 461T → I in AAB81160. 1 Publication

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AF006665 Genomic DNA. Translation: AAB81160.1. Different initiation.
AL009126 Genomic DNA. Translation: CAX52642.1.
RefSeqiYP_003097745.1. NC_000964.3.

Genome annotation databases

EnsemblBacteriaiCAX52642; CAX52642; BSU19689.
GeneIDi8303010.
KEGGibsu:BSU19689.
PATRICi18975795. VBIBacSub10457_2088.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AF006665 Genomic DNA. Translation: AAB81160.1 . Different initiation.
AL009126 Genomic DNA. Translation: CAX52642.1 .
RefSeqi YP_003097745.1. NC_000964.3.

3D structure databases

ModBasei Search...

Protein-protein interaction databases

STRINGi 224308.BSU19689.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAX52642 ; CAX52642 ; BSU19689 .
GeneIDi 8303010.
KEGGi bsu:BSU19689.
PATRICi 18975795. VBIBacSub10457_2088.

Organism-specific databases

GenoListi BSU19689.

Phylogenomic databases

eggNOGi NOG287725.
HOGENOMi HOG000089710.
OrthoDBi EOG6NKR3C.

Enzyme and pathway databases

BioCyci BSUB:BSU19689-MONOMER.

Family and domain databases

InterProi IPR022451. CHP03829_YokU.
IPR022453. Znf_YgiT-type.
[Graphical view ]
TIGRFAMsi TIGR03831. YgiT_finger. 1 hit.
TIGR03829. YokU_near_AblA. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Sequence analysis of the Bacillus subtilis 168 chromosome region between the sspC and odhA loci (184 degrees-180 degrees)."
    Ghim S.-Y., Choi S.-K., Shin B.-S., Jeong Y.-M., Sorokin A., Ehrlich S.D., Park S.-H.
    DNA Res. 5:195-201(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: 168.
  2. "The complete genome sequence of the Gram-positive bacterium Bacillus subtilis."
    Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V., Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R., Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S., Bruschi C.V.
    , Caldwell B., Capuano V., Carter N.M., Choi S.-K., Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F., Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D., Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M., Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P., Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K., Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S., Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y., Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G., Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J., Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C., Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S., Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B., Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S., Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M., Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y., Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J., Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A., Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M., Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S., Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E., Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K., Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E., Yoshikawa H., Danchin A.
    Nature 390:249-256(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 168.

Entry informationi

Entry nameiYOKU_BACSU
AccessioniPrimary (citable) accession number: C0H434
Secondary accession number(s): O30470
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 28, 2009
Last sequence update: May 5, 2009
Last modified: May 14, 2014
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Bacillus subtilis
    Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList

External Data

Dasty 3

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