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C0H434

- YOKU_BACSU

UniProt

C0H434 - YOKU_BACSU

Protein

Uncharacterized protein YokU

Gene

yokU

Organism
Bacillus subtilis (strain 168)
Status
Reviewed - Annotation score: 1 out of 5- Protein predictedi
  1. Functioni

    Enzyme and pathway databases

    BioCyciBSUB:BSU19689-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Uncharacterized protein YokU
    Gene namesi
    Name:yokU
    Ordered Locus Names:BSU19689
    OrganismiBacillus subtilis (strain 168)
    Taxonomic identifieri224308 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
    ProteomesiUP000001570: Chromosome

    Organism-specific databases

    GenoListiBSU19689.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 9292Uncharacterized protein YokUPRO_0000380080Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi224308.BSU19689.

    Family & Domainsi

    Phylogenomic databases

    eggNOGiNOG287725.
    HOGENOMiHOG000089710.
    OrthoDBiEOG6NKR3C.

    Family and domain databases

    InterProiIPR022451. CHP03829_YokU.
    IPR022453. Znf_YgiT-type.
    [Graphical view]
    TIGRFAMsiTIGR03831. YgiT_finger. 1 hit.
    TIGR03829. YokU_near_AblA. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    C0H434-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKTCEWCGEL EAVPGRNTVY WELPDGTRAI ELTDTPAMVC SSCGMTYQEE   50
    NTVKEIEDQL LLIQTKKLPE SLTYQQLMET ERILKRNYFD FS 92
    Length:92
    Mass (Da):10,703
    Last modified:May 5, 2009 - v1
    Checksum:i940C052312DBA37E
    GO

    Sequence cautioni

    The sequence AAB81160.1 differs from that shown. Reason: Erroneous initiation.

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Sequence conflicti46 – 461T → I in AAB81160. (PubMed:9734814)Curated

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AF006665 Genomic DNA. Translation: AAB81160.1. Different initiation.
    AL009126 Genomic DNA. Translation: CAX52642.1.
    RefSeqiYP_003097745.1. NC_000964.3.

    Genome annotation databases

    EnsemblBacteriaiCAX52642; CAX52642; BSU19689.
    GeneIDi8303010.
    KEGGibsu:BSU19689.
    PATRICi18975795. VBIBacSub10457_2088.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AF006665 Genomic DNA. Translation: AAB81160.1 . Different initiation.
    AL009126 Genomic DNA. Translation: CAX52642.1 .
    RefSeqi YP_003097745.1. NC_000964.3.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 224308.BSU19689.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAX52642 ; CAX52642 ; BSU19689 .
    GeneIDi 8303010.
    KEGGi bsu:BSU19689.
    PATRICi 18975795. VBIBacSub10457_2088.

    Organism-specific databases

    GenoListi BSU19689.

    Phylogenomic databases

    eggNOGi NOG287725.
    HOGENOMi HOG000089710.
    OrthoDBi EOG6NKR3C.

    Enzyme and pathway databases

    BioCyci BSUB:BSU19689-MONOMER.

    Family and domain databases

    InterProi IPR022451. CHP03829_YokU.
    IPR022453. Znf_YgiT-type.
    [Graphical view ]
    TIGRFAMsi TIGR03831. YgiT_finger. 1 hit.
    TIGR03829. YokU_near_AblA. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Sequence analysis of the Bacillus subtilis 168 chromosome region between the sspC and odhA loci (184 degrees-180 degrees)."
      Ghim S.-Y., Choi S.-K., Shin B.-S., Jeong Y.-M., Sorokin A., Ehrlich S.D., Park S.-H.
      DNA Res. 5:195-201(1998) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
      Strain: 168.
    2. "The complete genome sequence of the Gram-positive bacterium Bacillus subtilis."
      Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V., Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R., Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S., Bruschi C.V.
      , Caldwell B., Capuano V., Carter N.M., Choi S.-K., Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F., Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D., Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M., Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P., Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K., Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S., Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y., Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G., Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J., Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C., Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S., Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B., Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S., Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M., Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y., Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J., Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A., Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M., Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S., Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E., Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K., Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E., Yoshikawa H., Danchin A.
      Nature 390:249-256(1997) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 168.

    Entry informationi

    Entry nameiYOKU_BACSU
    AccessioniPrimary (citable) accession number: C0H434
    Secondary accession number(s): O30470
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: July 28, 2009
    Last sequence update: May 5, 2009
    Last modified: October 1, 2014
    This is version 25 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Bacillus subtilis
      Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList

    External Data

    Dasty 3