B9X0I1 (B9X0I1_PRUMU) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
(R)-hydroxynitrile lyase EMBL BAH23313.1

Gene names

Name:

PmHNL EMBL BAH23313.1

Organism

Prunus mume (Japanese apricot) (Armeniaca mume) EMBL BAH23313.1

Taxonomic identifier

102107 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Euphyllophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › fabids › Rosales › Rosaceae › Amygdaloideae › Amygdaleae › Prunus

Protein attributes

Sequence length	576 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

General annotation (Comments)

Sequence similarities

Belongs to the GMC oxidoreductase family. RuleBase RU003968

Ontologies

Keywords
Ligand	FAD RuleBase RU003968 Flavoprotein RuleBase RU003968
Molecular function	Lyase EMBL BAH23313.1
Technical term	3D-structure PDB 3RED
Gene Ontology (GO)
Biological_process	alcohol metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	choline dehydrogenase activity Inferred from electronic annotation. Source: InterPro flavin adenine dinucleotide binding Inferred from electronic annotation. Source: InterPro lyase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B9X0I1 [UniParc]. Last modified April 14, 2009. Version 1. Checksum: 32CEDD57C89A4C12	FASTA	576	62,752
	10 20 30 40 50 60 MEKSTMSAIL VLVLHLFVLH LQYSEVHSLA NTSAHDFSYL EFVYDANDTE LEGTYDYIIV 70 80 90 100 110 120 GGGTAGCPLA ATLSANYSVL VLERGTLPTE YPNLLTSDGF IYNLQQEDDG QTPVERFVSG 130 140 150 160 170 180 DGIDNVRGRV LGGTSMINAG VYVRANTSFF NQTGIEWDMD LVNKTYDWVE DTIVFKPDFQ 190 200 210 220 230 240 FWQNLTGTAF LEIGILPDNG FSLDHIEGTR LTGSTFDNNG TRHASDELLN KGDPNNLRVA 250 260 270 280 290 300 VHAAVEKIIF SSNSSGVTAI GVIYTDSNGT THQAFVRGEG EVILSAGPIG SPQLLLLSGV 310 320 330 340 350 360 GPESYLTSLN ISVVASHPYV GQYIYDNPRN FINILPPNPI EPSTVTVLGI TSNFYQCSLS 370 380 390 400 410 420 SLPFSIAPFS FFPNPTYPLP NTTFAHIVNK VPGPLSHGTV TLQSTSDVRV APNVTFNYYS 430 440 450 460 470 480 NSTDLAHCVS GMKKIGEFLS SDALKPYKVE DLPGIDGFDI LGIPLPENQT DDAAFETFCQ 490 500 510 520 530 540 EAAASYWHYH GGCLVGEVLD DDFRVTGINA LRVVDGSTFP STPASHPQGF YLMLGRYVGS 550 560 570 KILQERLASE EALHKSTFQP KILELLESAL SFAFDT

References

[1]	"Characterization of a New (R)-Hydroxynitrile Lyase from the Japanese Apricot Prunus mume and cDNA Cloning and Secretory Expression of One of the Isozymes in Pichia pastoris." Fukuta Y., Nanda S., Kato Y., Yurimoto H., Sakai Y., Komeda H., Asano Y. Biosci. Biotechnol. Biochem. 75:214-220(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[2]	"Crystal Structure of a native FAD-dependent Hydroxynitrile Lyase derived from the Japanese apricot, Prunus mume." Cielo C.B.C., Yamane T., Asano Y., Watanabe N., Suzuki A., Fukuta Y. Submitted (APR-2011) to the PDB data bank Cited for: X-RAY CRYSTALLOGRAPHY (3.03 ANGSTROMS) OF 29-546.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

AB455101 mRNA. Translation: BAH23313.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
3RED	X-ray	3.03	A/B/C/D/E/F/G/H/I/J/K/L	29-546	[»]

ModBase

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Protocols and materials databases

StructuralBiologyKnowledgebase

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Family and domain databases

InterPro

IPR012132. GMC_OxRdtase.
IPR000172. GMC_OxRdtase_N.
IPR007867. GMC_OxRtase_C.
[Graphical view]

Pfam

PF05199. GMC_oxred_C. 1 hit.
PF00732. GMC_oxred_N. 1 hit.
[Graphical view]

PIRSF

PIRSF000137. Alcohol_oxidase. 1 hit.

PROSITE

PS00623. GMC_OXRED_1. 1 hit.
PS00624. GMC_OXRED_2. 1 hit.
[Graphical view]

ProtoNet

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Entry information

Entry name

B9X0I1_PRUMU

Accession

Primary (citable) accession number: B9X0I1

Entry history

Integrated into UniProtKB/TrEMBL:	April 14, 2009
Last sequence update:	April 14, 2009
Last modified:	October 3, 2012
This is version 17 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)