ID   B9WBD3_CANDC            Unreviewed;       269 AA.
AC   B9WBD3;
DT   24-MAR-2009, integrated into UniProtKB/TrEMBL.
DT   24-MAR-2009, sequence version 1.
DT   24-JAN-2024, entry version 71.
DE   SubName: Full=DNA-directed RNA polymerase II subunit, putative {ECO:0000313|EMBL:CAX43703.1};
DE            EC=2.7.7.6 {ECO:0000313|EMBL:CAX43703.1};
GN   OrderedLocusNames=Cd36_19230 {ECO:0000313|CGD:CAL0000169595};
GN   ORFNames=CD36_19230 {ECO:0000313|EMBL:CAX43703.1};
OS   Candida dubliniensis (strain CD36 / ATCC MYA-646 / CBS 7987 / NCPF 3949 /
OS   NRRL Y-17841) (Yeast).
OC   Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes;
OC   Saccharomycetales; Debaryomycetaceae; Candida/Lodderomyces clade; Candida.
OX   NCBI_TaxID=573826 {ECO:0000313|EMBL:CAX43703.1, ECO:0000313|Proteomes:UP000002605};
RN   [1] {ECO:0000313|EMBL:CAX43703.1, ECO:0000313|Proteomes:UP000002605}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=CD36 / ATCC MYA-646 / CBS 7987 / NCPF 3949 / NRRL Y-17841
RC   {ECO:0000313|Proteomes:UP000002605};
RX   PubMed=19745113; DOI=10.1101/gr.097501.109;
RA   Jackson A.P., Gamble J.A., Yeomans T., Moran G.P., Saunders D., Harris D.,
RA   Aslett M., Barrell J.F., Butler G., Citiulo F., Coleman D.C.,
RA   de Groot P.W.J., Goodwin T.J., Quail M.A., McQuillan J., Munro C.A.,
RA   Pain A., Poulter R.T., Rajandream M.A., Renauld H., Spiering M.J.,
RA   Tivey A., Gow N.A.R., Barrell B., Sullivan D.J., Berriman M.;
RT   "Comparative genomics of the fungal pathogens Candida dubliniensis and
RT   Candida albicans.";
RL   Genome Res. 19:2231-2244(2009).
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC   -!- SIMILARITY: Belongs to the eukaryotic RPB4 RNA polymerase subunit
CC       family. {ECO:0000256|ARBA:ARBA00025724}.
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DR   EMBL; FM992689; CAX43703.1; -; Genomic_DNA.
DR   RefSeq; XP_002418403.1; XM_002418358.1.
DR   AlphaFoldDB; B9WBD3; -.
DR   GeneID; 8045954; -.
DR   KEGG; cdu:CD36_19230; -.
DR   CGD; CAL0000169595; Cd36_19230.
DR   VEuPathDB; FungiDB:CD36_19230; -.
DR   eggNOG; KOG2351; Eukaryota.
DR   HOGENOM; CLU_110332_0_0_1; -.
DR   OrthoDB; 5477031at2759; -.
DR   Proteomes; UP000002605; Chromosome 2.
DR   GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-EC.
DR   GO; GO:0000166; F:nucleotide binding; IEA:InterPro.
DR   GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR   GO; GO:0006366; P:transcription by RNA polymerase II; IEA:UniProt.
DR   Gene3D; 1.20.1250.40; -; 1.
DR   InterPro; IPR010997; HRDC-like_sf.
DR   InterPro; IPR006590; RNA_pol_Rpb4/RPC9_core.
DR   InterPro; IPR045222; Rpb4-like.
DR   InterPro; IPR005574; Rpb4/RPC9.
DR   InterPro; IPR038324; Rpb4/RPC9_sf.
DR   PANTHER; PTHR21297; DNA-DIRECTED RNA POLYMERASE II; 1.
DR   PANTHER; PTHR21297:SF0; DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4; 1.
DR   Pfam; PF03874; RNA_pol_Rpb4; 1.
DR   SMART; SM00657; RPOL4c; 1.
DR   SUPFAM; SSF47819; HRDC-like; 2.
PE   3: Inferred from homology;
KW   DNA-directed RNA polymerase {ECO:0000313|EMBL:CAX43703.1};
KW   Nucleotidyltransferase {ECO:0000313|EMBL:CAX43703.1};
KW   Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW   Transcription {ECO:0000313|EMBL:CAX43703.1};
KW   Transferase {ECO:0000313|EMBL:CAX43703.1}.
FT   DOMAIN          145..269
FT                   /note="RNA polymerase Rpb4/RPC9 core"
FT                   /evidence="ECO:0000259|SMART:SM00657"
FT   REGION          66..179
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        80..136
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        143..167
FT                   /note="Acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   269 AA;  30047 MW;  32BE09F42508A7C7 CRC64;
     MNVSTSALGV RRRKVATQNI DDEENAAVLK LGPEFQLNQI TNDGEQQQLI ALNLSEARLL
     IRAALKERKH NKNKNKKKKS NNNNNINNKS RLNGNGSNDI NNNGSGNGNG DITNDGNNIS
     NNDTNTNTNT NEDNINGDKG NNEKEEDEDD DDDDDDDDDD DENSKEDEIS NMELAGPNSN
     EIVHKTLNFL TNFARFKNRS SCETVEKLLN DFSDHCNESL HPFELAQLGT LECEDPEEAK
     SLIPSLQNKV SDVQLQTLLT ELRKYQTLS
//