B9WBD3 (B9WBD3_CANDC) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
DNA-directed RNA polymerase II subunit, putative EMBL CAX43703.1
EC=2.7.7.6 EMBL CAX43703.1

Gene names

ORF Names:

CD36_19230 EMBL CAX43703.1

Organism

Candida dubliniensis (strain CD36 / ATCC MYA-646 / CBS 7987 / NCPF 3949 / NRRL Y-17841) (Yeast) [Complete proteome]

Taxonomic identifier

573826 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Fungi › Dikarya › Ascomycota › saccharomyceta › Saccharomycotina › Saccharomycetes › Saccharomycetales › mitosporic Saccharomycetales › Candida › Candida dubliniensis

Protein attributes

Sequence length	269 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Biological process	Transcription
Cellular component	DNA-directed RNA polymerase EMBL CAX43703.1
Molecular function	Nucleotidyltransferase EMBL CAX43703.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	transcription, DNA-dependent Inferred from electronic annotation. Source: InterPro
Molecular_function	DNA-directed RNA polymerase activity Inferred from electronic annotation. Source: UniProtKB-KW nucleotide binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B9WBD3 [UniParc]. Last modified March 24, 2009. Version 1. Checksum: 32BE09F42508A7C7	FASTA	269	30,047
	10 20 30 40 50 60 MNVSTSALGV RRRKVATQNI DDEENAAVLK LGPEFQLNQI TNDGEQQQLI ALNLSEARLL 70 80 90 100 110 120 IRAALKERKH NKNKNKKKKS NNNNNINNKS RLNGNGSNDI NNNGSGNGNG DITNDGNNIS 130 140 150 160 170 180 NNDTNTNTNT NEDNINGDKG NNEKEEDEDD DDDDDDDDDD DENSKEDEIS NMELAGPNSN 190 200 210 220 230 240 EIVHKTLNFL TNFARFKNRS SCETVEKLLN DFSDHCNESL HPFELAQLGT LECEDPEEAK 250 260 SLIPSLQNKV SDVQLQTLLT ELRKYQTLS

References

[1]

"Comparative genomics of the fungal pathogens Candida dubliniensis and Candida albicans." Jackson A.P., Gamble J.A., Yeomans T., Moran G.P., Saunders D., Harris D., Aslett M., Barrell J.F., Butler G., Citiulo F., Coleman D.C., de Groot P.W., Goodwin T.J., Quail M.A., McQuillan J., Munro C.A., Pain A., Poulter R.T. , Rajandream M.A., Renauld H., Spiering M.J., Tivey A., Gow N.A., Barrell B., Sullivan D.J., Berriman M. Genome Res. 19:2231-2244(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: CD36 / ATCC MYA-646 / CBS 7987 / NCPF 3949 / NRRL Y-17841.

Cross-references

Sequence databases
EMBL GenBank DDBJ	FM992689 Genomic DNA. Translation: CAX43703.1.
RefSeq	XP_002418403.1. XM_002418358.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	573826.CD36_19230.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	8045954.
KEGG	cdu:CD36_19230.
Phylogenomic databases
eggNOG	COG5250.
HOGENOM	HOG000195281.
KO	K03012.
OrthoDB	EOG4ZGSNW.
Family and domain databases
InterPro	IPR010997. HRDC-like. IPR005574. RNA_pol_II_Rpb4. IPR006590. RNA_pol_II_Rpb4_core. [Graphical view]
Pfam	PF03874. RNA_pol_Rpb4. 1 hit. [Graphical view]
SMART	SM00657. RPOL4c. 1 hit. [Graphical view]
SUPFAM	SSF47819. HRDC_like. 2 hits.
ProtoNet	Search...

Entry information

Entry name

B9WBD3_CANDC

Accession

Primary (citable) accession number: B9WBD3

Entry history

Integrated into UniProtKB/TrEMBL:	March 24, 2009
Last sequence update:	March 24, 2009
Last modified:	April 3, 2013
This is version 24 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)