4-aminobutyrate aminotransferase, putative (Gamma-amino-n-butyrate transaminase, putative) (Gaba transaminase, putative) (Gaba aminotransferase, putative) - Candida dubliniensis (strain CD36 / ATCC MYA-646 / CBS 7987 / NCPF 3949 / NRRL Y-17841) (Yeast)

Contribute

Send feedback

Read comments (?) or add your own

B9WB92 (B9WB92_CANDC) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 26. History...

Clusters with 100%, 90%, 50% identity |

Third-party data

text xml rdf/xml gff fasta

Names·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info Customize order

Names and origin

Protein names

Submitted name:
4-aminobutyrate aminotransferase, putative (Gamma-amino-n-butyrate transaminase, putative) (Gaba transaminase, putative) (Gaba aminotransferase, putative) EMBL CAX43662.1
EC=2.6.1.19 EMBL CAX43662.1

Gene names

ORF Names:

CD36_18820 EMBL CAX43662.1

Organism

Candida dubliniensis (strain CD36 / ATCC MYA-646 / CBS 7987 / NCPF 3949 / NRRL Y-17841) (Yeast) [Complete proteome]

Taxonomic identifier

573826 [NCBI]

Taxonomic lineage

Eukaryota › Fungi › Dikarya › Ascomycota › Saccharomycotina › Saccharomycetes › Saccharomycetales › mitosporic Saccharomycetales › Candida ›

Protein attributes

Sequence length	471 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. RuleBase RU003560

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU003560
Molecular function	Aminotransferase EMBL CAX43662.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	gamma-aminobutyric acid metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	4-aminobutyrate transaminase activity Inferred from electronic annotation. Source: EC pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

Sequence

Length

Mass (Da)

Tools

B9WB92 [UniParc].

Last modified March 24, 2009. Version 1.
Checksum: FCAAB44A9D750CB0
Show »

FASTA

471

52,672

        10         20         30         40         50         60 
MSSKSVSSLY FPEEPKEPVV VDSHAKSNEI ADRLGKVFDN RGVYFVADYQ KSVGNYIADV 

        70         80         90        100        110        120 
DGNVYLDVYA QIASIPLGYN NPALIETAKS DKMIRAIVDR PAIGNFPGKD TDEIVAEILK 

       130        140        150        160        170        180 
VAPKGQDKVW SGLSGADANE LAFKAAFFYY QAKKRGYTTQ FSEEEMKSVM QNEAPGSPEL 

       190        200        210        220        230        240 
AILSFERGFH GRLFASGSTT CSKPIHKLDM PSFKWPKAQF PSYKYPLDKY AEENKKEDER 

       250        260        270        280        290        300 
CLKIVDDIIQ NNKIPVAAVL VEPIQSEGGD NHASAEFFQG LRDITLKHGS LLIMDEVQTG 

       310        320        330        340        350        360 
VGATGVMWAH ERFNLQPPPD LVTFSKKFQS AGYFFHDPEI IPNFAYRQFN TWCGDPARMI 

       370        380        390        400        410        420 
LAGAIGQEIL KHDLVKRAAE VGDYLFKKLE QLQEKYPKYI KDLRGKDRAT FIAWSLESGE 

       430        440        450        460        470 
ARNKFLSDMK TVGVNIGGCA EDSVRLRPTL VFEEKHADIL VNAIDKLLAS Y

« Hide

References

[1]

"Comparative genomics of the fungal pathogens Candida dubliniensis and Candida albicans."
Jackson A.P., Gamble J.A., Yeomans T., Moran G.P., Saunders D., Harris D., Aslett M., Barrell J.F., Butler G., Citiulo F., Coleman D.C., de Groot P.W., Goodwin T.J., Quail M.A., McQuillan J., Munro C.A., Pain A., Poulter R.T.

Berriman M.
Genome Res. 19:2231-2244(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CD36 / ATCC MYA-646 / CBS 7987 / NCPF 3949 / NRRL Y-17841.

Cross-references

Sequence databases
EMBL GenBank DDBJ	FM992689 Genomic DNA. Translation: CAX43662.1.
RefSeq	XP_002418362.1. XM_002418317.1.
3D structure databases
ProteinModelPortal	B9WB92.
ModBase	Search...
Protein-protein interaction databases
STRING	573826.CD36_18820.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	8045914.
KEGG	cdu:CD36_18820.
Phylogenomic databases
eggNOG	COG0160.
HOGENOM	HOG000020208.
KO	K13524.
OrthoDB	EOG4HX88H.
Family and domain databases
Gene3D	3.40.640.10. 1 hit. 3.90.1150.10. 2 hits.
InterPro	IPR004631. 4NH2But_aminotransferase_euk. IPR005814. Aminotrans_3. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. [Graphical view]
PANTHER	PTHR11986. PTHR11986. 1 hit. PTHR11986:SF6. PTHR11986:SF6. 1 hit.
Pfam	PF00202. Aminotran_3. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR00699. GABAtrns_euk. 1 hit.
PROSITE	PS00600. AA_TRANSFER_CLASS_3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B9WB92_CANDC

Accession

Primary (citable) accession number: B9WB92

Entry history

Integrated into UniProtKB/TrEMBL:	March 24, 2009
Last sequence update:	March 24, 2009
Last modified:	April 3, 2013
This is version 26 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Names·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info

Preferred order of sections

Names and origin

Protein attributes

General annotation (Comments)

Ontologies

Sequences

References

Cross-references

Sequence databases

3D structure databases

Protein-protein interaction databases

Protocols and materials databases

Genome annotation databases

Phylogenomic databases

Family and domain databases

Entry information