B9SWU1 (B9SWU1_RICCO) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Transcription cofactor, putative EMBL EEF31930.1

Gene names

ORF Names:

RCOM_0011080 EMBL EEF31930.1

Organism

Ricinus communis (Castor bean) [Complete proteome]

Taxonomic identifier

3988 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Euphyllophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › fabids › Malpighiales › Euphorbiaceae › Acalyphoideae › Acalypheae › Ricinus

Protein attributes

Sequence length	1382 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: InterPro
Molecular_function	transcription cofactor activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B9SWU1 [UniParc]. Last modified March 24, 2009. Version 1. Checksum: FCF21B10E017A132	FASTA	1,382	152,390
	10 20 30 40 50 60 MDTNNWRPTA QGGEPAVDTG DWRATLQPDS RQRIVNKIME TLKRHLPFSG QEGLEELKKI 70 80 90 100 110 120 AVRFEEKIYT AATSQSDYLR KISLKMLTME SKSQNNVPNS VPPNPFGNNN RPPDPGASQS 130 140 150 160 170 180 MQPQVHNQGQ SLPVPLSANQ TQTRQQLLSQ NIQNNMASTG IQSSAGLTSA LPPVSGLAQT 190 200 210 220 230 240 SIPNVVGQNS NMQNISGVPQ NSAGNSLGQG VPSNMFANSQ RQMPRQQVVP QQQQQQSQNP 250 260 270 280 290 300 TQYMYQQQQI QQQLMKQKFQ QGNLPPNNLV QSHLQQQQQQ QQQNLLQPAQ LQSSQQSSMQ 310 320 330 340 350 360 TSSVMQPSLM QSAPLSGLQQ NQPSTVQQSA QSMLQQHPQS VLRQQQQPQQ ASSIHQQQAS 370 380 390 400 410 420 MMQQSLLPHH HQQQQQQQLM GQQQNATNMQ QNQLIGQQNN VGDMQQQQQR LLGQQNNIQN 430 440 450 460 470 480 LQQQHQQHQQ QQQQQLMAQQ NNLSSMHQQQ LGSQSNVSGL QQQQQHLLGT QPGNSGMQTN 490 500 510 520 530 540 QQSMHMLQRP KVPLQQQTHQ SASNLLPTQG QQPQPQPQLP QQQLPSQIQS QPTQLQQQLA 550 560 570 580 590 600 LQQQSNTLQR DMQAGLQASS QAPSSLTQQQ NVIDQQKQLY QSQRPLPETS STSLDSTAQT 610 620 630 640 650 660 GHANAVDVQE EVYQKIKAMK EMYFPELNEM YHKIATKLQQ HDSLPQPPKT EQLEKLRLFK 670 680 690 700 710 720 SMLERIITFL QVPKSSVMPS FREKLGSYEK QIINFINTNR PKRQITSMQQ GQLSQPQIQQ 730 740 750 760 770 780 PQSQVPQVQS HESQMNPQMQ SMNMQGSVQT MQQNNMSSLQ QTPLPSLSGV SSSQQSMMSS 790 800 810 820 830 840 MQSASNLDSV QGNVMSSLQQ GGLGSHQQNP VSSAQQANIP NLSSQSGVNM LQPNISLQSN 850 860 870 880 890 900 SNMLQHQHLK QHQEQQMLKQ QFQHRHMQQH LIQKQQILQQ QQQQQQQQQQ QQQQLHQQSK 910 920 930 940 950 960 QQLPAQMQAH QMPQVHQMND VNDLKIRPGM GVKPGVFQQH LSAGQRTTYP HQQMKPGASF 970 980 990 1000 1010 1020 PISSPQLLQA ASPQLTQHSS PQIDQQNLLS SLTKTGTPLQ SANSPFVVQS PSTPLAPSPM 1030 1040 1050 1060 1070 1080 PGDSEKPITG ISSLSNAGNI GQQQATVAQA PVPSLAIGTP GISASPLLAE FTGSDVGLAN 1090 1100 1110 1120 1130 1140 TLTTASGKST VTEQPLERLI KAVKSMSPKA LSASVSDIGS VVSMIDRIAS SAPGNGSRAA 1150 1160 1170 1180 1190 1200 VGEDLVAMTN CRLQARNFIT QDGMSGTRKM RRYTSAMPLN VVSSASSISD SFKQFNGAET 1210 1220 1230 1240 1250 1260 SELESTATSS VKRPRLEANH ALLEEIREIN QRLIDTVVDI SEEDVDPTAG AATAGGGEGT 1270 1280 1290 1300 1310 1320 IVKCSFSAVA LSPNLKSQYA SAQMSPIQPL RLLVPTNYPN CSPILLDKLP VEVSKEYEDL 1330 1340 1350 1360 1370 1380 SVKAKSRFNI SLRSLSQPMS LGEIARTWDV CARAVISEHA QQSGGGSFSS KYGTWENCLS AA

References

[1]

"Draft genome sequence of the oilseed species Ricinus communis." Chan A.P., Crabtree J., Zhao Q., Lorenzi H., Orvis J., Puiu D., Melake-Berhan A., Jones K.M., Redman J., Chen G., Cahoon E.B., Gedil M., Stanke M., Haas B.J., Wortman J.R., Fraser-Liggett C.M., Ravel J., Rabinowicz P.D. Nat. Biotechnol. 28:951-956(2010) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Hale.

Cross-references

Sequence databases
EMBL GenBank DDBJ	EQ974211 Genomic DNA. Translation: EEF31930.1.
RefSeq	XP_002530460.1. XM_002530414.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	8283101.
KEGG	rcu:RCOM_0011080.
Phylogenomic databases
KO	K14972.
ProtClustDB	CLSN2912681.
Family and domain databases
Gene3D	1.10.246.20. 1 hit.
InterPro	IPR003101. KIX_dom. [Graphical view]
SUPFAM	SSF47040. KIX. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B9SWU1_RICCO

Accession

Primary (citable) accession number: B9SWU1

Entry history

Integrated into UniProtKB/TrEMBL:	March 24, 2009
Last sequence update:	March 24, 2009
Last modified:	March 6, 2013
This is version 22 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)