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Protein

Glutamate decarboxylase

Gene

RCOM_0112460

Organism
Ricinus communis (Castor bean)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

DecarboxylaseUniRule annotation, Lyase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
Gene namesi
ORF Names:RCOM_0112460Imported
OrganismiRicinus communis (Castor bean)Imported
Taxonomic identifieri3988 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsMalpighialesEuphorbiaceaeAcalyphoideaeAcalypheaeRicinus
ProteomesiUP000008311 Componenti: Unassembled WGS sequence

Structurei

3D structure databases

ProteinModelPortaliB9SR94.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

InParanoidiB9SR94.
KOiK01580.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

Sequencei

Sequence statusi: Complete.

B9SR94-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPQNSIPKEA AYQIINDELM LDGNPRLNLA SFVTTWMEPE CDKLIMSSVN
60 70 80 90 100
KNYVDMDEYP VTTELQNRCV NMIAHLFNAP LGDSETAVGV GTVGSSEAIM
110 120 130 140 150
LAGLAFKRKW QNRRKAEGKP YDSPNIVTGA NVQVCWEKFA RYFEVELKEV
160 170 180 190 200
KLRENYYVMD PEKAVEMVDE NTICVAAILG STLNGEFEDV KLLNDLLVEK
210 220 230 240 250
NKKTGWNTPI HVDAASGGFI APFLYPELEW DFRLPLVKSI NVSGHKYGLV
260 270 280 290 300
YAGIGWIIWR SKEDLPEELI FHINYLGADQ PTFTLNFSKG SSQVIAQYYQ
310 320 330 340 350
LIRLGFEGYK NVMENCRDNM LVLKEGLEQT GRFNIVSKDI GVPLVAFSLK
360 370 380 390 400
DNSQHNEFEL TDLLRRYGWI IPAYTMPPDA QHVTVLRVVI REDFSRTLAE
410 420 430 440 450
RLLNDVQKVL HELDSLPSKL LSKVSICGDD DNNVVVKKTA LETQREVTMV
460
WKKFVMEKKK MNGVC
Length:465
Mass (Da):52,856
Last modified:March 24, 2009 - v1
Checksum:i25A44AF65AFF4BFA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
EQ974095 Genomic DNA. Translation: EEF33882.1.
RefSeqiXP_002528513.1. XM_002528467.1.

Genome annotation databases

GeneIDi8258740.
KEGGircu:RCOM_0112460.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
EQ974095 Genomic DNA. Translation: EEF33882.1.
RefSeqiXP_002528513.1. XM_002528467.1.

3D structure databases

ProteinModelPortaliB9SR94.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi8258740.
KEGGircu:RCOM_0112460.

Phylogenomic databases

InParanoidiB9SR94.
KOiK01580.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. HaleImported.

Entry informationi

Entry nameiB9SR94_RICCO
AccessioniPrimary (citable) accession number: B9SR94
Entry historyi
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: February 4, 2015
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.