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B9SR94 (B9SR94_RICCO) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 27. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=4.1.1.15 EMBL EEF33882.1
Gene names
ORF Names:RCOM_0112460 EMBL EEF33882.1
OrganismRicinus communis (Castor bean) [Complete proteome]
Taxonomic identifier3988 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsMalpighialesEuphorbiaceaeAcalyphoideaeAcalypheaeRicinus

Protein attributes

Sequence length465 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Sequences

Sequence LengthMass (Da)Tools
B9SR94 [UniParc].

Last modified March 24, 2009. Version 1.
Checksum: 25A44AF65AFF4BFA

FASTA46552,856
        10         20         30         40         50         60 
MPQNSIPKEA AYQIINDELM LDGNPRLNLA SFVTTWMEPE CDKLIMSSVN KNYVDMDEYP 

        70         80         90        100        110        120 
VTTELQNRCV NMIAHLFNAP LGDSETAVGV GTVGSSEAIM LAGLAFKRKW QNRRKAEGKP 

       130        140        150        160        170        180 
YDSPNIVTGA NVQVCWEKFA RYFEVELKEV KLRENYYVMD PEKAVEMVDE NTICVAAILG 

       190        200        210        220        230        240 
STLNGEFEDV KLLNDLLVEK NKKTGWNTPI HVDAASGGFI APFLYPELEW DFRLPLVKSI 

       250        260        270        280        290        300 
NVSGHKYGLV YAGIGWIIWR SKEDLPEELI FHINYLGADQ PTFTLNFSKG SSQVIAQYYQ 

       310        320        330        340        350        360 
LIRLGFEGYK NVMENCRDNM LVLKEGLEQT GRFNIVSKDI GVPLVAFSLK DNSQHNEFEL 

       370        380        390        400        410        420 
TDLLRRYGWI IPAYTMPPDA QHVTVLRVVI REDFSRTLAE RLLNDVQKVL HELDSLPSKL 

       430        440        450        460 
LSKVSICGDD DNNVVVKKTA LETQREVTMV WKKFVMEKKK MNGVC 

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References

[1]"Draft genome sequence of the oilseed species Ricinus communis."
Chan A.P., Crabtree J., Zhao Q., Lorenzi H., Orvis J., Puiu D., Melake-Berhan A., Jones K.M., Redman J., Chen G., Cahoon E.B., Gedil M., Stanke M., Haas B.J., Wortman J.R., Fraser-Liggett C.M., Ravel J., Rabinowicz P.D.
Nat. Biotechnol. 28:951-956(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Hale.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
EQ974095 Genomic DNA. Translation: EEF33882.1.
RefSeqXP_002528513.1. XM_002528467.1.

3D structure databases

ProteinModelPortalB9SR94.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID8258740.
KEGGrcu:RCOM_0112460.

Phylogenomic databases

KOK01580.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB9SR94_RICCO
AccessionPrimary (citable) accession number: B9SR94
Entry history
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: May 14, 2014
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)