B9SR94 (B9SR94_RICCO) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glutamate decarboxylase, putative EMBL EEF33882.1
EC=4.1.1.15 EMBL EEF33882.1

Gene names

ORF Names:

RCOM_0112460 EMBL EEF33882.1

Organism

Ricinus communis (Castor bean) [Complete proteome]

Taxonomic identifier

3988 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Euphyllophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › fabids › Malpighiales › Euphorbiaceae › Acalyphoideae › Acalypheae › Ricinus

Protein attributes

Sequence length	465 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000382
Sequence similarities	Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000382
Molecular function	Lyase RuleBase RU000382 EMBL EEF33882.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	glutamate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	glutamate decarboxylase activity Inferred from electronic annotation. Source: EC pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B9SR94 [UniParc]. Last modified March 24, 2009. Version 1. Checksum: 25A44AF65AFF4BFA	FASTA	465	52,856
	10 20 30 40 50 60 MPQNSIPKEA AYQIINDELM LDGNPRLNLA SFVTTWMEPE CDKLIMSSVN KNYVDMDEYP 70 80 90 100 110 120 VTTELQNRCV NMIAHLFNAP LGDSETAVGV GTVGSSEAIM LAGLAFKRKW QNRRKAEGKP 130 140 150 160 170 180 YDSPNIVTGA NVQVCWEKFA RYFEVELKEV KLRENYYVMD PEKAVEMVDE NTICVAAILG 190 200 210 220 230 240 STLNGEFEDV KLLNDLLVEK NKKTGWNTPI HVDAASGGFI APFLYPELEW DFRLPLVKSI 250 260 270 280 290 300 NVSGHKYGLV YAGIGWIIWR SKEDLPEELI FHINYLGADQ PTFTLNFSKG SSQVIAQYYQ 310 320 330 340 350 360 LIRLGFEGYK NVMENCRDNM LVLKEGLEQT GRFNIVSKDI GVPLVAFSLK DNSQHNEFEL 370 380 390 400 410 420 TDLLRRYGWI IPAYTMPPDA QHVTVLRVVI REDFSRTLAE RLLNDVQKVL HELDSLPSKL 430 440 450 460 LSKVSICGDD DNNVVVKKTA LETQREVTMV WKKFVMEKKK MNGVC

References

[1]

"Draft genome sequence of the oilseed species Ricinus communis." Chan A.P., Crabtree J., Zhao Q., Lorenzi H., Orvis J., Puiu D., Melake-Berhan A., Jones K.M., Redman J., Chen G., Cahoon E.B., Gedil M., Stanke M., Haas B.J., Wortman J.R., Fraser-Liggett C.M., Ravel J., Rabinowicz P.D. Nat. Biotechnol. 28:951-956(2010) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Hale.

Cross-references

Sequence databases
EMBL GenBank DDBJ	EQ974095 Genomic DNA. Translation: EEF33882.1.
RefSeq	XP_002528513.1. XM_002528467.1.
3D structure databases
ProteinModelPortal	B9SR94.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	8258740.
KEGG	rcu:RCOM_0112460.
Phylogenomic databases
KO	K01580.
ProtClustDB	CLSN2683665.
Family and domain databases
Gene3D	3.40.640.10. 1 hit.
InterPro	IPR010107. Glutamate_decarboxylase. IPR002129. PyrdxlP-dep_de-COase. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. [Graphical view]
PANTHER	PTHR11999:SF1. PTHR11999:SF1. 1 hit.
Pfam	PF00282. Pyridoxal_deC. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B9SR94_RICCO

Accession

Primary (citable) accession number: B9SR94

Entry history

Integrated into UniProtKB/TrEMBL:	March 24, 2009
Last sequence update:	March 24, 2009
Last modified:	March 6, 2013
This is version 24 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)