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B9SNW1 (B9SNW1_RICCO) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 28. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=4.1.1.15 EMBL EEF34679.1
Gene names
ORF Names:RCOM_0582120 EMBL EEF34679.1
OrganismRicinus communis (Castor bean) [Complete proteome]
Taxonomic identifier3988 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsMalpighialesEuphorbiaceaeAcalyphoideaeAcalypheaeRicinus

Protein attributes

Sequence length529 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Sequences

Sequence LengthMass (Da)Tools
B9SNW1 [UniParc].

Last modified March 24, 2009. Version 1.
Checksum: 09D81A84A3D7AFD5

FASTA52959,595
        10         20         30         40         50         60 
MRTLPLTANS SSLPLSSLSL LCLKFSPKQE DFCTPKLTPM VISTTITDSD EVLHSTFASR 

        70         80         90        100        110        120 
YVRTPVPRFK MPEKSMPKEA AYQVINDELM LDGNPRLNLA SFVTTWMEPE CNNLIMASIN 

       130        140        150        160        170        180 
KNYVDMDEYP VTTELQDRCV NMIAHMFHAP VGDDETAVGV GTVGSSEAIM LAGLAFKRKW 

       190        200        210        220        230        240 
QHKRIAEGKP SDKPNIVTGA NVQVCWEKFA RYFEVELKEV KLKEGYYVMD PVKAVEMVDE 

       250        260        270        280        290        300 
NTICIAAILG STLTGEFEDV KLLSELLTKR NEETGWNTPI HVDAASGGFI APFVYPDLEW 

       310        320        330        340        350        360 
DFRLPLVKSI NVSGHKYGLV YAGVGWVVWR TKEDLPEELI FHINYLGSDQ PTFTLNFSKG 

       370        380        390        400        410        420 
SSQIIAQYYQ FIRLGFEGYK EIIENCMDNA RALKQGLQKT GRFDIVSKDV GVPLVAFSLK 

       430        440        450        460        470        480 
DSSKYNVFQL SESLRRFGWI IPAYTMPADA QHIAVLRVVV REDFSRGLAE RLVKHIEQVL 

       490        500        510        520 
EEMESLHGYV STKATAVKQQ PTESTKGKQV TEKSEREKRN ILLDIGGRL 

« Hide

References

[1]"Draft genome sequence of the oilseed species Ricinus communis."
Chan A.P., Crabtree J., Zhao Q., Lorenzi H., Orvis J., Puiu D., Melake-Berhan A., Jones K.M., Redman J., Chen G., Cahoon E.B., Gedil M., Stanke M., Haas B.J., Wortman J.R., Fraser-Liggett C.M., Ravel J., Rabinowicz P.D.
Nat. Biotechnol. 28:951-956(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Hale.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
EQ974054 Genomic DNA. Translation: EEF34679.1.
RefSeqXP_002527680.1. XM_002527634.1.

3D structure databases

ProteinModelPortalB9SNW1.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID8289124.
KEGGrcu:RCOM_0582120.

Phylogenomic databases

KOK01580.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB9SNW1_RICCO
AccessionPrimary (citable) accession number: B9SNW1
Entry history
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: May 14, 2014
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)