B9SN28 (B9SN28_RICCO) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Beta-galactosidase, putative EMBL EEF34963.1
EC=3.2.1.23 EMBL EEF34963.1

Gene names

ORF Names:

RCOM_0311630 EMBL EEF34963.1

Organism

Ricinus communis (Castor bean) [Complete proteome]

Taxonomic identifier

3988 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Euphyllophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › fabids › Malpighiales › Euphorbiaceae › Acalyphoideae › Acalypheae › Ricinus

Protein attributes

Sequence length	605 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 35 family. RuleBase RU003679

Ontologies

Keywords
Molecular function	Glycosidase SAAS SAAS001944 EMBL EEF34963.1 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	beta-galactosidase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B9SN28 [UniParc]. Last modified March 24, 2009. Version 1. Checksum: C96CD8D0B35D0DB4	FASTA	605	67,673
	10 20 30 40 50 60 MVTKKRSHPK TTLFLAVIIC LLALAVLVPV VFAPLPSLSH SHSHRHRKVN ARRSFEINDD 70 80 90 100 110 120 MFWRDGKPFR IIGGDLHYFR ILPQYWEDRL LRAKALGLNT VQTYVPWNLH EPQPGRLVFE 130 140 150 160 170 180 GIADLVSFLQ LCQKLDLLVM LRPGPYICAG SRYTTDGGSR ETLEKGTIRG DTVFSAVDFA 190 200 210 220 230 240 TGDDPWPIFN LQKKFNAPGK SPPLSAEFYT GWLTHWGEKI AQTDAEFTAS SLEKILSRNG 250 260 270 280 290 300 SAVLYMAHGG TNFGFYNGAN TGADESDYKP DLTSYDYDAP ISESGDVDNA KFNALRRVIG 310 320 330 340 350 360 VHSAASLPSV PPNNDKTGYG PIQLHKTTFL FDLLDTINPA DVVESKNPVS MESAGQMFGF 370 380 390 400 410 420 LVYVTRYAPK VDGSTLYIPE VHDRGQVFTL CPSDGSSGRP VYAGAIERWS NQKVLLPNSK 430 440 450 460 470 480 CASNISLFVL VENMGRVNYG RYMFDRKGIL SSVYLDGRIL NGWRMISLPL HNLNEVPKIN 490 500 510 520 530 540 PIIQAVHSTL STRTKLEDYP RSFSIEPAFY TGYFFIEKED QVKDTFISFS GWGKGIAFVN 550 560 570 580 590 600 DFNLGRYWPS FGPQCNLYVP SPVLRHGKNV LVILELESPH SELVIHSVSQ PDFKCGSSRL NVHQL

References

[1]

"Draft genome sequence of the oilseed species Ricinus communis." Chan A.P., Crabtree J., Zhao Q., Lorenzi H., Orvis J., Puiu D., Melake-Berhan A., Jones K.M., Redman J., Chen G., Cahoon E.B., Gedil M., Stanke M., Haas B.J., Wortman J.R., Fraser-Liggett C.M., Ravel J., Rabinowicz P.D. Nat. Biotechnol. 28:951-956(2010) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Hale.

Cross-references

Sequence databases
EMBL GenBank DDBJ	EQ974042 Genomic DNA. Translation: EEF34963.1.
RefSeq	XP_002527397.1. XM_002527351.1.
3D structure databases
ProteinModelPortal	B9SN28.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	8288580.
KEGG	rcu:RCOM_0311630.
Phylogenomic databases
KO	K12309.
ProtClustDB	CLSN2689173.
Family and domain databases
Gene3D	3.20.20.80. 2 hits.
InterPro	IPR026283. B-gal_1-like. IPR008979. Galactose-bd-like. IPR013781. Glyco_hydro_catalytic_dom. IPR001944. Glycoside_Hdrlase_35. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
PANTHER	PTHR23421. PTHR23421. 1 hit.
Pfam	PF01301. Glyco_hydro_35. 2 hits. [Graphical view]
PIRSF	PIRSF006336. B-gal. 1 hit.
PRINTS	PR00742. GLHYDRLASE35.
SUPFAM	SSF49785. Gal_bind_like. 1 hit. SSF51445. Glyco_hydro_cat. 2 hits.
ProtoNet	Search...

Entry information

Entry name

B9SN28_RICCO

Accession

Primary (citable) accession number: B9SN28

Entry history

Integrated into UniProtKB/TrEMBL:	March 24, 2009
Last sequence update:	March 24, 2009
Last modified:	May 1, 2013
This is version 27 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)