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Protein
Submitted name:

Beta-galactosidase, putative

Gene

RCOM_0311630

Organism
Ricinus communis (Castor bean)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. beta-galactosidase activity Source: UniProtKB-EC

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseSAAS annotationImported, Hydrolase

Names & Taxonomyi

Protein namesi
Submitted name:
Beta-galactosidase, putativeImported (EC:3.2.1.23Imported)
Gene namesi
ORF Names:RCOM_0311630Imported
OrganismiRicinus communis (Castor bean)Imported
Taxonomic identifieri3988 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsMalpighialesEuphorbiaceaeAcalyphoideaeAcalypheaeRicinus
ProteomesiUP000008311: Unassembled WGS sequence

Structurei

3D structure databases

ProteinModelPortaliB9SN28.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 35 family.UniRule annotation

Phylogenomic databases

InParanoidiB9SN28.
KOiK12309.

Family and domain databases

Gene3Di2.60.120.260. 1 hit.
3.20.20.80. 2 hits.
InterProiIPR026283. B-gal_1-like.
IPR008979. Galactose-bd-like.
IPR013781. Glyco_hydro_catalytic_dom.
IPR001944. Glycoside_Hdrlase_35.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR23421. PTHR23421. 1 hit.
PfamiPF01301. Glyco_hydro_35. 2 hits.
[Graphical view]
PIRSFiPIRSF006336. B-gal. 1 hit.
PRINTSiPR00742. GLHYDRLASE35.
SUPFAMiSSF49785. SSF49785. 2 hits.
SSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

B9SN28-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVTKKRSHPK TTLFLAVIIC LLALAVLVPV VFAPLPSLSH SHSHRHRKVN
60 70 80 90 100
ARRSFEINDD MFWRDGKPFR IIGGDLHYFR ILPQYWEDRL LRAKALGLNT
110 120 130 140 150
VQTYVPWNLH EPQPGRLVFE GIADLVSFLQ LCQKLDLLVM LRPGPYICAG
160 170 180 190 200
SRYTTDGGSR ETLEKGTIRG DTVFSAVDFA TGDDPWPIFN LQKKFNAPGK
210 220 230 240 250
SPPLSAEFYT GWLTHWGEKI AQTDAEFTAS SLEKILSRNG SAVLYMAHGG
260 270 280 290 300
TNFGFYNGAN TGADESDYKP DLTSYDYDAP ISESGDVDNA KFNALRRVIG
310 320 330 340 350
VHSAASLPSV PPNNDKTGYG PIQLHKTTFL FDLLDTINPA DVVESKNPVS
360 370 380 390 400
MESAGQMFGF LVYVTRYAPK VDGSTLYIPE VHDRGQVFTL CPSDGSSGRP
410 420 430 440 450
VYAGAIERWS NQKVLLPNSK CASNISLFVL VENMGRVNYG RYMFDRKGIL
460 470 480 490 500
SSVYLDGRIL NGWRMISLPL HNLNEVPKIN PIIQAVHSTL STRTKLEDYP
510 520 530 540 550
RSFSIEPAFY TGYFFIEKED QVKDTFISFS GWGKGIAFVN DFNLGRYWPS
560 570 580 590 600
FGPQCNLYVP SPVLRHGKNV LVILELESPH SELVIHSVSQ PDFKCGSSRL

NVHQL
Length:605
Mass (Da):67,673
Last modified:March 24, 2009 - v1
Checksum:iC96CD8D0B35D0DB4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
EQ974042 Genomic DNA. Translation: EEF34963.1.
RefSeqiXP_002527397.1. XM_002527351.1.

Genome annotation databases

GeneIDi8288580.
KEGGircu:RCOM_0311630.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
EQ974042 Genomic DNA. Translation: EEF34963.1.
RefSeqiXP_002527397.1. XM_002527351.1.

3D structure databases

ProteinModelPortaliB9SN28.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi8288580.
KEGGircu:RCOM_0311630.

Phylogenomic databases

InParanoidiB9SN28.
KOiK12309.

Family and domain databases

Gene3Di2.60.120.260. 1 hit.
3.20.20.80. 2 hits.
InterProiIPR026283. B-gal_1-like.
IPR008979. Galactose-bd-like.
IPR013781. Glyco_hydro_catalytic_dom.
IPR001944. Glycoside_Hdrlase_35.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR23421. PTHR23421. 1 hit.
PfamiPF01301. Glyco_hydro_35. 2 hits.
[Graphical view]
PIRSFiPIRSF006336. B-gal. 1 hit.
PRINTSiPR00742. GLHYDRLASE35.
SUPFAMiSSF49785. SSF49785. 2 hits.
SSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. HaleImported.

Entry informationi

Entry nameiB9SN28_RICCO
AccessioniPrimary (citable) accession number: B9SN28
Entry historyi
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: January 7, 2015
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.