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B9SN28 (B9SN28_RICCO) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 31. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=3.2.1.23 EMBL EEF34963.1
Gene names
ORF Names:RCOM_0311630 EMBL EEF34963.1
OrganismRicinus communis (Castor bean) [Complete proteome]
Taxonomic identifier3988 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsMalpighialesEuphorbiaceaeAcalyphoideaeAcalypheaeRicinus

Protein attributes

Sequence length605 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 35 family. RuleBase RU003679

Ontologies

Keywords
   Molecular functionGlycosidase SAAS SAAS001944 EMBL EEF34963.1
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionbeta-galactosidase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B9SN28 [UniParc].

Last modified March 24, 2009. Version 1.
Checksum: C96CD8D0B35D0DB4

FASTA60567,673
        10         20         30         40         50         60 
MVTKKRSHPK TTLFLAVIIC LLALAVLVPV VFAPLPSLSH SHSHRHRKVN ARRSFEINDD 

        70         80         90        100        110        120 
MFWRDGKPFR IIGGDLHYFR ILPQYWEDRL LRAKALGLNT VQTYVPWNLH EPQPGRLVFE 

       130        140        150        160        170        180 
GIADLVSFLQ LCQKLDLLVM LRPGPYICAG SRYTTDGGSR ETLEKGTIRG DTVFSAVDFA 

       190        200        210        220        230        240 
TGDDPWPIFN LQKKFNAPGK SPPLSAEFYT GWLTHWGEKI AQTDAEFTAS SLEKILSRNG 

       250        260        270        280        290        300 
SAVLYMAHGG TNFGFYNGAN TGADESDYKP DLTSYDYDAP ISESGDVDNA KFNALRRVIG 

       310        320        330        340        350        360 
VHSAASLPSV PPNNDKTGYG PIQLHKTTFL FDLLDTINPA DVVESKNPVS MESAGQMFGF 

       370        380        390        400        410        420 
LVYVTRYAPK VDGSTLYIPE VHDRGQVFTL CPSDGSSGRP VYAGAIERWS NQKVLLPNSK 

       430        440        450        460        470        480 
CASNISLFVL VENMGRVNYG RYMFDRKGIL SSVYLDGRIL NGWRMISLPL HNLNEVPKIN 

       490        500        510        520        530        540 
PIIQAVHSTL STRTKLEDYP RSFSIEPAFY TGYFFIEKED QVKDTFISFS GWGKGIAFVN 

       550        560        570        580        590        600 
DFNLGRYWPS FGPQCNLYVP SPVLRHGKNV LVILELESPH SELVIHSVSQ PDFKCGSSRL 


NVHQL 

« Hide

References

[1]"Draft genome sequence of the oilseed species Ricinus communis."
Chan A.P., Crabtree J., Zhao Q., Lorenzi H., Orvis J., Puiu D., Melake-Berhan A., Jones K.M., Redman J., Chen G., Cahoon E.B., Gedil M., Stanke M., Haas B.J., Wortman J.R., Fraser-Liggett C.M., Ravel J., Rabinowicz P.D.
Nat. Biotechnol. 28:951-956(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Hale.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
EQ974042 Genomic DNA. Translation: EEF34963.1.
RefSeqXP_002527397.1. XM_002527351.1.

3D structure databases

ProteinModelPortalB9SN28.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID8288580.
KEGGrcu:RCOM_0311630.

Phylogenomic databases

KOK12309.

Family and domain databases

Gene3D2.60.120.260. 1 hit.
3.20.20.80. 2 hits.
InterProIPR026283. B-gal_1-like.
IPR008979. Galactose-bd-like.
IPR013781. Glyco_hydro_catalytic_dom.
IPR001944. Glycoside_Hdrlase_35.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR23421. PTHR23421. 1 hit.
PfamPF01301. Glyco_hydro_35. 2 hits.
[Graphical view]
PIRSFPIRSF006336. B-gal. 1 hit.
PRINTSPR00742. GLHYDRLASE35.
SUPFAMSSF49785. SSF49785. 2 hits.
SSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB9SN28_RICCO
AccessionPrimary (citable) accession number: B9SN28
Entry history
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: May 14, 2014
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)