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Protein

Glycerol-3-phosphate dehydrogenase [NAD(+)]

Gene

RCOM_0531780

Organism
Ricinus communis (Castor bean)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

sn-glycerol 3-phosphate + NAD+ = glycerone phosphate + NADH.UniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Binding sitei67NADUniRule annotation1
Binding sitei124NADUniRule annotation1
Binding sitei147SubstrateUniRule annotation1
Binding sitei180NAD; via amide nitrogenUniRule annotation1
Active sitei232Proton acceptorUniRule annotation1
Binding sitei296NADUniRule annotation1
Binding sitei325NAD; via amide nitrogenUniRule annotation1
Binding sitei327NADUniRule annotation1

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi36 – 41NADUniRule annotation6

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionOxidoreductaseUniRule annotationImported
LigandNADUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Glycerol-3-phosphate dehydrogenase [NAD(+)]UniRule annotation (EC:1.1.1.8UniRule annotation)
Gene namesi
ORF Names:RCOM_0531780Imported
OrganismiRicinus communis (Castor bean)Imported
Taxonomic identifieri3988 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsMalpighialesEuphorbiaceaeAcalyphoideaeAcalypheaeRicinus
Proteomesi
  • UP000008311 Componenti: Unassembled WGS sequence

Subcellular locationi

GO - Cellular componenti

Structurei

3D structure databases

ProteinModelPortaliB9SLT7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini31 – 198NAD_Gly3P_dh_NInterPro annotationAdd BLAST168
Domaini221 – 368NAD_Gly3P_dh_CInterPro annotationAdd BLAST148

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Regioni296 – 297Substrate bindingUniRule annotation2

Sequence similaritiesi

Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.UniRule annotation

Phylogenomic databases

InParanoidiB9SLT7.
KOiK00006.

Family and domain databases

Gene3Di1.10.1040.10. 1 hit.
3.40.50.720. 1 hit.
InterProiView protein in InterPro
IPR008927. 6-PGluconate_DH_C-like.
IPR013328. 6PGD_dom_2.
IPR006168. G3P_DH_NAD-dep.
IPR006109. G3P_DH_NAD-dep_C.
IPR017751. G3P_DH_NAD-dep_euk.
IPR011128. G3P_DH_NAD-dep_N.
IPR016040. NAD(P)-bd_dom.
PfamiView protein in Pfam
PF07479. NAD_Gly3P_dh_C. 1 hit.
PF01210. NAD_Gly3P_dh_N. 1 hit.
PIRSFiPIRSF000114. Glycerol-3-P_dh. 1 hit.
PRINTSiPR00077. GPDHDRGNASE.
SUPFAMiSSF48179. SSF48179. 1 hit.
SSF51735. SSF51735. 1 hit.
TIGRFAMsiTIGR03376. glycerol3P_DH. 1 hit.
PROSITEiView protein in PROSITE
PS00957. NAD_G3PDH. 1 hit.

Sequencei

Sequence statusi: Complete.

B9SLT7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAPPPAAPEA QETAPRSTFS NDSAAASHMS KVTVVGSGNW GTVAAKLIAS
60 70 80 90 100
NTLKLNYFHD EVRMWVFEET LPSGEKLSDV INRTNENVKY LPGIKLGKNV
110 120 130 140 150
IADPDIDNAV KDANMLVFVT PHQFMDGICK RLVRKIKDGV EAISLIKGME
160 170 180 190 200
VKMEGPCMIS SLISEQLGVN CCVLMGANIA NEIAVEKFSE ATVGFRTNRE
210 220 230 240 250
IAEKWVQLFS TPYFMVTAVQ DVEGVELCGT LKNVVALAAG FVDGLEMGNN
260 270 280 290 300
TKAAMMRIGL REMRALSKLL FSSVKDSTFF ESCGVADVIT TCLGGRNRKV
310 320 330 340 350
AEAFARNGGK RSFDELEAEM LQGQKLQGVS TAREVYEVLS HRGWLELFPL
360 370 380
FATVHEICIG RLPPSAIVEY SEHKPNFALV
Length:380
Mass (Da):41,518
Last modified:March 24, 2009 - v1
Checksum:i12D2A8AE82CFB376
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
EQ974021 Genomic DNA. Translation: EEF35443.1.
RefSeqiXP_002526956.1. XM_002526910.2.

Genome annotation databases

GeneIDi8260340.
KEGGircu:8260340.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
EQ974021 Genomic DNA. Translation: EEF35443.1.
RefSeqiXP_002526956.1. XM_002526910.2.

3D structure databases

ProteinModelPortaliB9SLT7.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi8260340.
KEGGircu:8260340.

Phylogenomic databases

InParanoidiB9SLT7.
KOiK00006.

Family and domain databases

Gene3Di1.10.1040.10. 1 hit.
3.40.50.720. 1 hit.
InterProiView protein in InterPro
IPR008927. 6-PGluconate_DH_C-like.
IPR013328. 6PGD_dom_2.
IPR006168. G3P_DH_NAD-dep.
IPR006109. G3P_DH_NAD-dep_C.
IPR017751. G3P_DH_NAD-dep_euk.
IPR011128. G3P_DH_NAD-dep_N.
IPR016040. NAD(P)-bd_dom.
PfamiView protein in Pfam
PF07479. NAD_Gly3P_dh_C. 1 hit.
PF01210. NAD_Gly3P_dh_N. 1 hit.
PIRSFiPIRSF000114. Glycerol-3-P_dh. 1 hit.
PRINTSiPR00077. GPDHDRGNASE.
SUPFAMiSSF48179. SSF48179. 1 hit.
SSF51735. SSF51735. 1 hit.
TIGRFAMsiTIGR03376. glycerol3P_DH. 1 hit.
PROSITEiView protein in PROSITE
PS00957. NAD_G3PDH. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiB9SLT7_RICCO
AccessioniPrimary (citable) accession number: B9SLT7
Entry historyiIntegrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: February 15, 2017
This is version 49 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.