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B9SLS5 (B9SLS5_RICCO) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 30. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=1.3.5.1 EMBL EEF35431.1
Gene names
ORF Names:RCOM_0530950 EMBL EEF35431.1
OrganismRicinus communis (Castor bean) [Complete proteome]
Taxonomic identifier3988 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsMalpighialesEuphorbiaceaeAcalyphoideaeAcalypheaeRicinus

Protein attributes

Sequence length284 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
B9SLS5 [UniParc].

Last modified March 24, 2009. Version 1.
Checksum: 4FC536AFDB9B23C0

FASTA28431,772
        10         20         30         40         50         60 
MATGLLRKGL SIARVSKTAP FTSRLIPTRF HASEAEAQKV EPKASSTASL KTFQIYRWNP 

        70         80         90        100        110        120 
DNPSKPTLQD YKIDLKECGP MVLDALIKIK NEIDPTLTFR RSCREGICGS CAMNIDGCNG 

       130        140        150        160        170        180 
LACLTKISSG STSSTITPLP HMFVIKDLVV DMTNFYNQYK SIEPWLKRKN PPPVDGKEIP 

       190        200        210        220        230        240 
QSKKDRAKLD GMYECILCAC CSTSCPSYWW NPESYLGPAA LLHANRWISD SRDEYTNERL 

       250        260        270        280 
DAINDEFKLY RCHTILNCAR ACPKGLNPGK QIMHIKQLQM VGGA 

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References

[1]"Draft genome sequence of the oilseed species Ricinus communis."
Chan A.P., Crabtree J., Zhao Q., Lorenzi H., Orvis J., Puiu D., Melake-Berhan A., Jones K.M., Redman J., Chen G., Cahoon E.B., Gedil M., Stanke M., Haas B.J., Wortman J.R., Fraser-Liggett C.M., Ravel J., Rabinowicz P.D.
Nat. Biotechnol. 28:951-956(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Hale.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
EQ974021 Genomic DNA. Translation: EEF35431.1.
RefSeqXP_002526944.1. XM_002526898.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID8260328.
KEGGrcu:RCOM_0530950.

Phylogenomic databases

KOK00235.

Family and domain databases

Gene3D3.10.20.30. 1 hit.
InterProIPR001041. 2Fe-2S_ferredoxin-type.
IPR006058. 2Fe2S_fd_BS.
IPR017896. 4Fe4S_Fe-S-bd.
IPR017900. 4Fe4S_Fe_S_CS.
IPR012675. Beta-grasp_dom.
IPR009051. Helical_ferredxn.
IPR004489. Succ_DH/fum_Rdtase_Fe-S.
IPR025192. Succ_DH/fum_Rdtase_N.
[Graphical view]
PfamPF13085. Fer2_3. 1 hit.
[Graphical view]
SUPFAMSSF46548. SSF46548. 1 hit.
SSF54292. SSF54292. 1 hit.
TIGRFAMsTIGR00384. dhsB. 1 hit.
PROSITEPS00197. 2FE2S_FER_1. 1 hit.
PS51085. 2FE2S_FER_2. 1 hit.
PS00198. 4FE4S_FER_1. 1 hit.
PS51379. 4FE4S_FER_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB9SLS5_RICCO
AccessionPrimary (citable) accession number: B9SLS5
Entry history
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: May 14, 2014
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)