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B9SLA6 (B9SLA6_RICCO) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 27. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=1.3.3.1 EMBL EEF35606.1
Gene names
ORF Names:RCOM_0164820 EMBL EEF35606.1
OrganismRicinus communis (Castor bean) [Complete proteome]
Taxonomic identifier3988 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsMalpighialesEuphorbiaceaeAcalyphoideaeAcalypheaeRicinus

Protein attributes

Sequence length454 AA.
Sequence statusComplete.
Protein existenceInferred from homology

Ontologies

Keywords
   Molecular functionOxidoreductase EMBL EEF35606.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_process'de novo' pyrimidine nucleobase biosynthetic process

Inferred from electronic annotation. Source: InterPro

UMP biosynthetic process

Inferred from electronic annotation. Source: InterPro

   Cellular_componentmembrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functiondihydroorotate oxidase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B9SLA6 [UniParc].

Last modified March 24, 2009. Version 1.
Checksum: C92D550F7E89F1D8

FASTA45448,653
        10         20         30         40         50         60 
MAARASRRLL REFLYKKRTI VGGVRCMNSS APETLPKIPH FSRKGRLLTG ATIGLVIAGG 

        70         80         90        100        110        120 
AYVSTVDEAT FCGWLFNATK LVNPFFALLD AEDAHTLAVS AAARGWVPRE KRSDPSILGL 

       130        140        150        160        170        180 
EVWGRKFSNP LGLAAGFDKN AEAVEGLLGL GFGSVEVGSV TPVPQEGNPK PRIFRLREEG 

       190        200        210        220        230        240 
AIINRCGFNS EGIVAVAKRL GAQHGKRKLD ETSSTSSSPS DDVKHGGKAG PGILGVNLGK 

       250        260        270        280        290        300 
NKTSEDAAAD YVQGVHTLSQ YADYLVINVS SPNTPGLRML QGRKQLKDLV KKVQAARDEM 

       310        320        330        340        350        360 
QWGEEGPPPL LVKIAPDLSK EDLEDIAAVA LALRLDGLII TNTTISRPDL VRKYPVAEES 

       370        380        390        400        410        420 
GGLSGKPLFD LSTDILKEMY ILTRGKIPLI GCGGISSGED AYRKIRAGAT LVQIYTAFAY 

       430        440        450 
GGPALIPQIK TELAECLERD GFKSILEAVG ADYR 

« Hide

References

[1]"Draft genome sequence of the oilseed species Ricinus communis."
Chan A.P., Crabtree J., Zhao Q., Lorenzi H., Orvis J., Puiu D., Melake-Berhan A., Jones K.M., Redman J., Chen G., Cahoon E.B., Gedil M., Stanke M., Haas B.J., Wortman J.R., Fraser-Liggett C.M., Ravel J., Rabinowicz P.D.
Nat. Biotechnol. 28:951-956(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Hale.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
EQ974014 Genomic DNA. Translation: EEF35606.1.
RefSeqXP_002526775.1. XM_002526729.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID8262675.
KEGGrcu:RCOM_0164820.

Phylogenomic databases

KOK00254.

Family and domain databases

Gene3D3.20.20.70. 1 hit.
HAMAPMF_00225. DHO_dh_type2.
InterProIPR013785. Aldolase_TIM.
IPR012135. Dihydroorotate_DH_1_2.
IPR005719. Dihydroorotate_DH_2.
IPR001295. Dihydroorotate_DH_CS.
[Graphical view]
PfamPF01180. DHO_dh. 1 hit.
[Graphical view]
TIGRFAMsTIGR01036. pyrD_sub2. 1 hit.
PROSITEPS00911. DHODEHASE_1. 1 hit.
PS00912. DHODEHASE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB9SLA6_RICCO
AccessionPrimary (citable) accession number: B9SLA6
Entry history
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: May 14, 2014
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)