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B9SD19 (B9SD19_RICCO) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 29. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:RCOM_1067650 EMBL EEF38457.1
OrganismRicinus communis (Castor bean) [Complete proteome]
Taxonomic identifier3988 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsMalpighialesEuphorbiaceaeAcalyphoideaeAcalypheaeRicinus

Protein attributes

Sequence length364 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the RuBisCO large chain family. RuleBase RU004228

Ontologies

Sequences

Sequence LengthMass (Da)Tools
B9SD19 [UniParc].

Last modified March 24, 2009. Version 1.
Checksum: E5F21F46EF3A7AFD

FASTA36440,448
        10         20         30         40         50         60 
MSPQTETKAS VGFKAGVKDY KLTYYTPEYE TKDTNILVAF RVTPQPGVPL EEARATVAVE 

        70         80         90        100        110        120 
SSTGTWTTMW TDGLTSLDRY KGRCYHIEPV AGEENQFIAY VAYPLDLFEE GSVTNMFTSI 

       130        140        150        160        170        180 
VGPPHGIQVE RDKLNKYGCP LLDCTIKPKL GLSAKNYGRA VYECLRGGLD FTKDDENVNS 

       190        200        210        220        230        240 
QPFMRTCEKM LKRAVFAREL GVPIVMHDYL TGGFTANTTL AHYCRDNGLL LHIHRAMHAV 

       250        260        270        280        290        300 
IDRQKNHGMH FHVLAKVLHM SSGDHIHAGT VVDRIRGIYF TQDWVSLPGV LPVASGGHPW 

       310        320        330        340        350        360 
GNAPGVVANR VALEACVQAR NEGHDLAREG NEIICEVGKW SPELAAACEI WKEITFDFPT 


MDTL 

« Hide

References

[1]"Draft genome sequence of the oilseed species Ricinus communis."
Chan A.P., Crabtree J., Zhao Q., Lorenzi H., Orvis J., Puiu D., Melake-Berhan A., Jones K.M., Redman J., Chen G., Cahoon E.B., Gedil M., Stanke M., Haas B.J., Wortman J.R., Fraser-Liggett C.M., Ravel J., Rabinowicz P.D.
Nat. Biotechnol. 28:951-956(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Hale.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
EQ973925 Genomic DNA. Translation: EEF38457.1.
RefSeqXP_002523888.1. XM_002523842.1.

3D structure databases

ProteinModelPortalB9SD19.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID8263354.
KEGGrcu:RCOM_1067650.

Phylogenomic databases

KOK01601.
ProtClustDBCLSN2696277.

Family and domain databases

Gene3D3.20.20.110. 3 hits.
3.30.70.150. 1 hit.
InterProIPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view]
PfamPF00016. RuBisCO_large. 4 hits.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB9SD19_RICCO
AccessionPrimary (citable) accession number: B9SD19
Entry history
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: February 19, 2014
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)