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Protein
Submitted name:

Putative uncharacterized protein

Gene

RCOM_1067650

Organism
Ricinus communis (Castor bean)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
ORF Names:RCOM_1067650Imported
OrganismiRicinus communis (Castor bean)Imported
Taxonomic identifieri3988 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsMalpighialesEuphorbiaceaeAcalyphoideaeAcalypheaeRicinus
Proteomesi
  • UP000008311 Componenti: Unassembled WGS sequence

PTM / Processingi

Proteomic databases

PRIDEiB9SD19.

Structurei

3D structure databases

ProteinModelPortaliB9SD19.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini24 – 127RuBisCO_large_NInterPro annotationAdd BLAST104
Domaini126 – 186RuBisCO_largeInterPro annotationAdd BLAST61
Domaini186 – 297RuBisCO_largeInterPro annotationAdd BLAST112
Domaini297 – 351RuBisCO_largeInterPro annotationAdd BLAST55

Phylogenomic databases

InParanoidiB9SD19.

Family and domain databases

Gene3Di3.20.20.110. 3 hits.
3.30.70.150. 1 hit.
InterProiIPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 3 hits.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B9SD19-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSPQTETKAS VGFKAGVKDY KLTYYTPEYE TKDTNILVAF RVTPQPGVPL
60 70 80 90 100
EEARATVAVE SSTGTWTTMW TDGLTSLDRY KGRCYHIEPV AGEENQFIAY
110 120 130 140 150
VAYPLDLFEE GSVTNMFTSI VGPPHGIQVE RDKLNKYGCP LLDCTIKPKL
160 170 180 190 200
GLSAKNYGRA VYECLRGGLD FTKDDENVNS QPFMRTCEKM LKRAVFAREL
210 220 230 240 250
GVPIVMHDYL TGGFTANTTL AHYCRDNGLL LHIHRAMHAV IDRQKNHGMH
260 270 280 290 300
FHVLAKVLHM SSGDHIHAGT VVDRIRGIYF TQDWVSLPGV LPVASGGHPW
310 320 330 340 350
GNAPGVVANR VALEACVQAR NEGHDLAREG NEIICEVGKW SPELAAACEI
360
WKEITFDFPT MDTL
Length:364
Mass (Da):40,448
Last modified:March 24, 2009 - v1
Checksum:iE5F21F46EF3A7AFD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
EQ973925 Genomic DNA. Translation: EEF38457.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
EQ973925 Genomic DNA. Translation: EEF38457.1.

3D structure databases

ProteinModelPortaliB9SD19.
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PRIDEiB9SD19.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

InParanoidiB9SD19.

Family and domain databases

Gene3Di3.20.20.110. 3 hits.
3.30.70.150. 1 hit.
InterProiIPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 3 hits.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiB9SD19_RICCO
AccessioniPrimary (citable) accession number: B9SD19
Entry historyi
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: October 5, 2016
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.