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B9RUR8 (B9RUR8_RICCO) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 27. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=3.2.1.2 EMBL EEF45055.1
Gene names
ORF Names:RCOM_0856140 EMBL EEF45055.1
OrganismRicinus communis (Castor bean) [Complete proteome]
Taxonomic identifier3988 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsMalpighialesEuphorbiaceaeAcalyphoideaeAcalypheaeRicinus

Protein attributes

Sequence length547 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 14 family. RuleBase RU004157

Ontologies

Keywords
   Molecular functionGlycosidase EMBL EEF45055.1
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processpolysaccharide catabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionbeta-amylase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B9RUR8 [UniParc].

Last modified March 24, 2009. Version 1.
Checksum: AAAEC9A5439CEF61

FASTA54761,147
        10         20         30         40         50         60 
MSLTLHSSTS FINIKDTKSV KTPDDFSGTI CFAQIKPSCR LGAKNSMQEA QLSQDNIFTM 

        70         80         90        100        110        120 
EGRRSDNREK LHAMSNSQSS NDSKVPVFVM LPLDTVTLGG NLNKPRAMNA SLMALKSAGV 

       130        140        150        160        170        180 
EGVMVDAWWG LVEKDGPRKY NWEGYADLVH MVQKHGLKLQ VVMSFHQCGG NVGDSCSIPL 

       190        200        210        220        230        240 
PPWVLEEISK NPDLVYTDRS GRRNPEYISL GCDSLPVLRG RTPIQVYTDY MRSFCNRFRD 

       250        260        270        280        290        300 
YLGEVVVEIQ VGMGPCGELR YPAYPESNGT WKFPGIGEFQ CYDKYMKASL EASAEAIGNK 

       310        320        330        340        350        360 
DWGRGGPHDA GHYKQFPEET GFFRRDGTWK TEYGQFFLEW YSGKLLDHGD RILAAAKGIF 

       370        380        390        400        410        420 
QGTGAKLSGK VAGIHWHYRT RSHAPELTAG YYNTRHHDGY LTVAHMFSKH GVVFNFTCME 

       430        440        450        460        470        480 
MRDGEQPGHA NSSPEGLVRQ VKMATRSAGV ELAGENALER YDAAGYAQVL ATSRSESGNG 

       490        500        510        520        530        540 
LTAFTYLRMN KKLFEGDHWQ HLVEFVKSMS EHGQNKRLPE CDSEGTNLYI GFIKDKNAIR 


TKEVALL 

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References

[1]"Draft genome sequence of the oilseed species Ricinus communis."
Chan A.P., Crabtree J., Zhao Q., Lorenzi H., Orvis J., Puiu D., Melake-Berhan A., Jones K.M., Redman J., Chen G., Cahoon E.B., Gedil M., Stanke M., Haas B.J., Wortman J.R., Fraser-Liggett C.M., Ravel J., Rabinowicz P.D.
Nat. Biotechnol. 28:951-956(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Hale.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
EQ973817 Genomic DNA. Translation: EEF45055.1.
RefSeqXP_002517513.1. XM_002517467.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID8276068.
KEGGrcu:RCOM_0856140.

Phylogenomic databases

KOK01177.

Family and domain databases

Gene3D3.20.20.80. 1 hit.
InterProIPR001554. Glyco_hydro_14.
IPR018238. Glyco_hydro_14_CS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamPF01373. Glyco_hydro_14. 1 hit.
[Graphical view]
PRINTSPR00750. BETAAMYLASE.
SUPFAMSSF51445. SSF51445. 1 hit.
PROSITEPS00506. BETA_AMYLASE_1. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB9RUR8_RICCO
AccessionPrimary (citable) accession number: B9RUR8
Entry history
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: May 14, 2014
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)