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Protein
Submitted name:

Histone deacetylase, putative

Gene

RCOM_0797630

Organism
Ricinus communis (Castor bean)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. hydrolase activity Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

HydrolaseSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Histone deacetylase, putativeImported
Gene namesi
ORF Names:RCOM_0797630Imported
OrganismiRicinus communis (Castor bean)Imported
Taxonomic identifieri3988 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsMalpighialesEuphorbiaceaeAcalyphoideaeAcalypheaeRicinus
ProteomesiUP000008311 Componenti: Unassembled WGS sequence

Structurei

3D structure databases

ProteinModelPortaliB9RRT4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

InParanoidiB9RRT4.
KOiK11418.

Family and domain databases

Gene3Di3.40.800.20. 1 hit.
InterProiIPR000286. His_deacetylse.
IPR023801. His_deacetylse_dom.
[Graphical view]
PANTHERiPTHR10625. PTHR10625. 1 hit.
PfamiPF00850. Hist_deacetyl. 1 hit.
[Graphical view]
PRINTSiPR01270. HDASUPER.

Sequencei

Sequence statusi: Complete.

B9RRT4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSPPLSSRIL HRYIRSRQMS SSTTADSLTL RRNRIISSKL YFDIPLSKVP
60 70 80 90 100
IIYSPAYDIS FLGIEKLHPF DSSKWGRVCR FLVTEGVLDK NSIVEPLEAS
110 120 130 140 150
KDDLLVVHLE SYLSSLRSSA NVATIIEVPP VSLFPNCLVQ QKVLFPFRKQ
160 170 180 190 200
VGGTILAAKL AKERGWAINV GGGFHHCSSG KGGGFCAYAD ISLCIHFAFV
210 220 230 240 250
RLRISRVMII DLDAHQGNGH EMDFYDDNRI YILDMYNPGI YPLDYEARNY
260 270 280 290 300
IDQKVEIASG TRTDEYLREL DEALEVADQK FDPELVVYNA GTDILDGDPL
310 320 330 340
GRLKISPDGI TARDEKVFRF AREKNAPLVM LTSGPEIFLN VC
Length:342
Mass (Da):38,386
Last modified:March 24, 2009 - v1
Checksum:iBEFEC91940477F21
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
EQ973807 Genomic DNA. Translation: EEF45794.1.
RefSeqiXP_002516453.1. XM_002516407.1.

Genome annotation databases

GeneIDi8275606.
KEGGircu:RCOM_0797630.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
EQ973807 Genomic DNA. Translation: EEF45794.1.
RefSeqiXP_002516453.1. XM_002516407.1.

3D structure databases

ProteinModelPortaliB9RRT4.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi8275606.
KEGGircu:RCOM_0797630.

Phylogenomic databases

InParanoidiB9RRT4.
KOiK11418.

Family and domain databases

Gene3Di3.40.800.20. 1 hit.
InterProiIPR000286. His_deacetylse.
IPR023801. His_deacetylse_dom.
[Graphical view]
PANTHERiPTHR10625. PTHR10625. 1 hit.
PfamiPF00850. Hist_deacetyl. 1 hit.
[Graphical view]
PRINTSiPR01270. HDASUPER.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. HaleImported.

Entry informationi

Entry nameiB9RRT4_RICCO
AccessioniPrimary (citable) accession number: B9RRT4
Entry historyi
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: March 4, 2015
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.