Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

B9RNE0 (B9RNE0_RICCO) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 27. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
EC=2.1.1.43 EMBL EEF47263.1
Gene names
ORF Names:RCOM_1347120 EMBL EEF47263.1
OrganismRicinus communis (Castor bean) [Complete proteome]
Taxonomic identifier3988 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsMalpighialesEuphorbiaceaeAcalyphoideaeAcalypheaeRicinus

Protein attributes

Sequence length884 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Sequence similarities

Contains 1 SET domain. RuleBase RU004538

Contains SET domain. SAAS SAAS001214

Ontologies

Sequences

Sequence LengthMass (Da)Tools
B9RNE0 [UniParc].

Last modified March 24, 2009. Version 1.
Checksum: B5E784226F5E649A

FASTA88499,048
        10         20         30         40         50         60 
MLSKSTDSVS KLRKSHGEQS NECIGNLSYK MNLLKKQIQA ERIFSIKEKV ENNRKKLESD 

        70         80         90        100        110        120 
VAQIMLASSR IDALNIGQTN FSRIGSPLCK YSGFAQGSGD KDYINGHEVI PWTSTKIPFV 

       130        140        150        160        170        180 
ERIPPYTTWI FLDRNQRMAE DQSVVGRRRI YYDQNGNEAL ICSDSEEDIA EPEEEKHDFS 

       190        200        210        220        230        240 
EGEDRILWMV FQEHGLAEEV LNIVSQFIGV PISDIQERCS MLKERFDEEQ NGKDSGDSAS 

       250        260        270        280        290        300 
EKGISLEKSL SAALDSFDNL FCRRCLLFDC RLHGCSQALI NPSEKQPYWS EYEDDRKPCS 

       310        320        330        340        350        360 
DQCFLRLKVV RDLPESSVNC ALNRMKTASL EEGKKTAGAS NAQEPSGADD GADLSKDDSY 

       370        380        390        400        410        420 
ISQKEISVAS GTLCHSEASE ASNLDTCAMI HNQEHMRKRK EPELTNVDLD DSTPVPSDLH 

       430        440        450        460        470        480 
NSSNKKQKRL LGSDAASKDI ENISSLDDLA GTEKTTDTSE LQITTKNTLN NPSEYASKEI 

       490        500        510        520        530        540 
VSSAIEKILD EANDATKGPE LIQSSSTDRQ LEGVLSRSRW KPIEKELYLK GVEIFGKNSC 

       550        560        570        580        590        600 
LIARNLLSGL KTCMEVSNYM CDSGVTVPHK SVAPSSILDD NGKTDTDYTE QEISTRSRLL 

       610        620        630        640        650        660 
RKRGRTRKLK YSWKSAGHPA SWKRIADGKN QSCKQYTPCG CQSMCGKQCP CLHNGTCCEK 

       670        680        690        700        710        720 
YCGCSKSCKN RFRGCHCAKS QCRSRQCPCF AAGRECDPDV CRNCWVSCGD SSLGEPPKRG 

       730        740        750        760        770        780 
DGQCGNMRLL LRQQQRILLA KSNIAGWGAF LKNPVNKNDY LGEYTGELIS HREADKRGKI 

       790        800        810        820        830        840 
YDRANSSFLF DLNEQYVLDA YRKGDKLKFA NHSSNPNCYA KVMLVAGDHR VGIFAKEHIE 

       850        860        870        880 
ASEELFYDYR YGPDQAPAWA RKPEGSRRDE STVSQGRAKK HQSH 

« Hide

References

[1]"Draft genome sequence of the oilseed species Ricinus communis."
Chan A.P., Crabtree J., Zhao Q., Lorenzi H., Orvis J., Puiu D., Melake-Berhan A., Jones K.M., Redman J., Chen G., Cahoon E.B., Gedil M., Stanke M., Haas B.J., Wortman J.R., Fraser-Liggett C.M., Ravel J., Rabinowicz P.D.
Nat. Biotechnol. 28:951-956(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Hale.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
EQ973790 Genomic DNA. Translation: EEF47263.1.
RefSeqXP_002515279.1. XM_002515233.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID8267339.
KEGGrcu:RCOM_1347120.

Phylogenomic databases

KOK11430.

Family and domain databases

InterProIPR026489. CXC_dom.
IPR025778. Hist-Lys_N-MeTrfase_EZ.
IPR001005. SANT/Myb.
IPR001214. SET_dom.
[Graphical view]
PfamPF00856. SET. 1 hit.
[Graphical view]
SMARTSM00717. SANT. 1 hit.
SM00317. SET. 1 hit.
[Graphical view]
PROSITEPS51633. CXC. 1 hit.
PS51576. SAM_MT43_EZ. 1 hit.
PS50280. SET. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB9RNE0_RICCO
AccessionPrimary (citable) accession number: B9RNE0
Entry history
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: May 14, 2014
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)