B9RGA7 (B9RGA7_RICCO) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Beta-galactosidase, putative EMBL EEF49562.1
EC=3.2.1.23 EMBL EEF49562.1

Gene names

ORF Names:

RCOM_1452500 EMBL EEF49562.1

Organism

Ricinus communis (Castor bean) [Complete proteome]

Taxonomic identifier

3988 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Euphyllophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › fabids › Malpighiales › Euphorbiaceae › Acalyphoideae › Acalypheae › Ricinus

Protein attributes

Sequence length	1110 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Glycosidase EMBL EEF49562.1 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Cellular_component	beta-galactosidase complex Inferred from electronic annotation. Source: InterPro
Molecular_function	beta-galactosidase activity Inferred from electronic annotation. Source: EC carbohydrate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B9RGA7 [UniParc]. Last modified March 24, 2009. Version 1. Checksum: 41E8953F063F0DB9	FASTA	1,110	125,702
	10 20 30 40 50 60 MASLAANMVS PLETGHKVWE DPSFIKWRKR EPHVTLHCHE SVEGSLRYWY QRNKVDVLVS 70 80 90 100 110 120 KSAVWNDDAV KAALDCAAFW VKDLPFVKSM SGFWKFFLAP SPTKVPIKFY EPAFQDFEWQ 130 140 150 160 170 180 TLPVPSNWQM HGFDRPIYTN VVYPFPLDPP YVPEDNPTGC YRTYFQIPKE WQGRRILLHF 190 200 210 220 230 240 EAVDSAFCAW VNGVPVGYSQ DSRLPAEFEI TEYCYSCDSG KSNVLAVQVI RWSDGSYLED 250 260 270 280 290 300 QDHWWLSGIH RDVLLLAKPQ VFIVDYFFKS NLAEDFASAE IEVEVKLDSS QEMPKDKILD 310 320 330 340 350 360 NFVIEAALYD TESWYNSDGA ANLLSSQVAD IKINPSFDAI LGFLGYVLVG KVEKPKLWSA 370 380 390 400 410 420 EQPNLYILVL TLKDAFGHVV DCESCLVGIR QVSKAPKQLL VNGQPVIIRG VNRHEHHPRI 430 440 450 460 470 480 GKTNIESCMI KDLVLMKQNN INAVRNSHYP QHPRWYELCD LFGMYMIDEA NIETHGFHLS 490 500 510 520 530 540 GHIKHPTSEQ SWAIAMIDRV IGMVERDKNH ACIISWSLGN EASYGPNHSA AAGWIRGKDT 550 560 570 580 590 600 SRLVHYEGGG SRTPSTDIVC PMYMRVWDIV KIANDPTELR PLILCEYSHA MGNSSGNICE 610 620 630 640 650 660 YWEAIDSTFG LQGGFIWDWV DQGLLKENTD GSKYWAYGGD FGDTPNDLNF CLNGLTWPDR 670 680 690 700 710 720 SPHPALHEVK YVYQPIKVSL KGSTLKITNT YFFETTQGLE FSWAAHGDGH QLGSGILSLP 730 740 750 760 770 780 LMKPQSSYDI ELESGPWYPL WASYSGEIFL TVTAKLLHST PWVETGHVIS STQVQLPSRK 790 800 810 820 830 840 EIIPHVIKAT DATLSSEILG DTVRVSQQTF WEITLNIQTG TVESWKVEGV TIMNKGILPC 850 860 870 880 890 900 FWRAPTDNDK GGEENSYYSR WKAARIDNLE FLTKSCSIQE KTDHLVKIKA VYIGVPRDED 910 920 930 940 950 960 DSSQSSKQAL FEVDIIYEIF GSGDLIIECN VSPSSDLPPL PRVGVEFHLV ESVDHVRWYG 970 980 990 1000 1010 1020 KGPFECYPDR KAASHVGIYE KNVCDMHVPY IVPGECSGRA DVRWVTFQNK EGKGIFASMH 1030 1040 1050 1060 1070 1080 GNSPPMQMSV SYYSTRELHR ARHNKELVRG NDIEVHLDHK HMGIGGDDSW SPCVHEKYLV 1090 1100 1110 PAVPYSFSIR LCPITAATSG LRIYEPEHQN

References

[1]

"Draft genome sequence of the oilseed species Ricinus communis." Chan A.P., Crabtree J., Zhao Q., Lorenzi H., Orvis J., Puiu D., Melake-Berhan A., Jones K.M., Redman J., Chen G., Cahoon E.B., Gedil M., Stanke M., Haas B.J., Wortman J.R., Fraser-Liggett C.M., Ravel J., Rabinowicz P.D. Nat. Biotechnol. 28:951-956(2010) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Hale.

Cross-references

Sequence databases
EMBL GenBank DDBJ	EQ973778 Genomic DNA. Translation: EEF49562.1.
RefSeq	XP_002513059.1. XM_002513013.1.
3D structure databases
ProteinModelPortal	B9RGA7.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	8270882.
KEGG	rcu:RCOM_1452500.
Phylogenomic databases
KO	K01190.
ProtClustDB	CLSN2690605.
Family and domain databases
Gene3D	2.60.40.320. 2 hits. 2.70.98.10. 1 hit. 3.20.20.80. 1 hit.
InterPro	IPR004199. B-gal_small/dom_5. IPR011013. Gal_mutarotase_SF_dom. IPR008979. Galactose-bd-like. IPR014718. Glyco_hydro-type_carb-bd_sub. IPR006101. Glyco_hydro_2. IPR013812. Glyco_hydro_2/20_Ig-like. IPR023232. Glyco_hydro_2_AS. IPR023230. Glyco_hydro_2_CS. IPR006102. Glyco_hydro_2_Ig-like. IPR006104. Glyco_hydro_2_N. IPR006103. Glyco_hydro_2_TIM. IPR013781. Glyco_hydro_catalytic_dom. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Pfam	PF02929. Bgal_small_N. 1 hit. PF00703. Glyco_hydro_2. 1 hit. PF02836. Glyco_hydro_2_C. 1 hit. PF02837. Glyco_hydro_2_N. 1 hit. [Graphical view]
PRINTS	PR00132. GLHYDRLASE2.
SMART	SM01038. Bgal_small_N. 1 hit. [Graphical view]
SUPFAM	SSF49785. Gal_bind_like. 1 hit. SSF74650. Gal_mut_like. 1 hit. SSF49303. Glyco_hydro_2Ig. 2 hits. SSF51445. Glyco_hydro_cat. 1 hit.
PROSITE	PS00719. GLYCOSYL_HYDROL_F2_1. 1 hit. PS00608. GLYCOSYL_HYDROL_F2_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B9RGA7_RICCO

Accession

Primary (citable) accession number: B9RGA7

Entry history

Integrated into UniProtKB/TrEMBL:	March 24, 2009
Last sequence update:	March 24, 2009
Last modified:	May 1, 2013
This is version 27 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)