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Protein
Submitted name:

Beta-galactosidase, putative

Gene

RCOM_1452500

Organism
Ricinus communis (Castor bean)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. beta-galactosidase activity Source: UniProtKB-EC
  2. carbohydrate binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotationImported, Hydrolase

Names & Taxonomyi

Protein namesi
Submitted name:
Beta-galactosidase, putativeImported (EC:3.2.1.23Imported)
Gene namesi
ORF Names:RCOM_1452500Imported
OrganismiRicinus communis (Castor bean)Imported
Taxonomic identifieri3988 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsMalpighialesEuphorbiaceaeAcalyphoideaeAcalypheaeRicinus
ProteomesiUP000008311: Unassembled WGS sequence

Subcellular locationi

GO - Cellular componenti

  1. beta-galactosidase complex Source: InterPro
Complete GO annotation...

Structurei

3D structure databases

ProteinModelPortaliB9RGA7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 2 family.UniRule annotation

Phylogenomic databases

InParanoidiB9RGA7.
KOiK01190.

Family and domain databases

Gene3Di2.60.120.260. 2 hits.
2.60.40.320. 2 hits.
2.70.98.10. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR004199. B-gal_small/dom_5.
IPR011013. Gal_mutarotase_SF_dom.
IPR008979. Galactose-bd-like.
IPR014718. Glyco_hydro-type_carb-bd_sub.
IPR006101. Glyco_hydro_2.
IPR013812. Glyco_hydro_2/20_Ig-like.
IPR023232. Glyco_hydro_2_AS.
IPR023230. Glyco_hydro_2_CS.
IPR006102. Glyco_hydro_2_Ig-like.
IPR006104. Glyco_hydro_2_N.
IPR006103. Glyco_hydro_2_TIM.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamiPF02929. Bgal_small_N. 1 hit.
PF00703. Glyco_hydro_2. 1 hit.
PF02836. Glyco_hydro_2_C. 1 hit.
PF02837. Glyco_hydro_2_N. 1 hit.
[Graphical view]
PRINTSiPR00132. GLHYDRLASE2.
SMARTiSM01038. Bgal_small_N. 1 hit.
[Graphical view]
SUPFAMiSSF49303. SSF49303. 2 hits.
SSF49785. SSF49785. 1 hit.
SSF51445. SSF51445. 1 hit.
SSF74650. SSF74650. 1 hit.
PROSITEiPS00719. GLYCOSYL_HYDROL_F2_1. 1 hit.
PS00608. GLYCOSYL_HYDROL_F2_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B9RGA7-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MASLAANMVS PLETGHKVWE DPSFIKWRKR EPHVTLHCHE SVEGSLRYWY
60 70 80 90 100
QRNKVDVLVS KSAVWNDDAV KAALDCAAFW VKDLPFVKSM SGFWKFFLAP
110 120 130 140 150
SPTKVPIKFY EPAFQDFEWQ TLPVPSNWQM HGFDRPIYTN VVYPFPLDPP
160 170 180 190 200
YVPEDNPTGC YRTYFQIPKE WQGRRILLHF EAVDSAFCAW VNGVPVGYSQ
210 220 230 240 250
DSRLPAEFEI TEYCYSCDSG KSNVLAVQVI RWSDGSYLED QDHWWLSGIH
260 270 280 290 300
RDVLLLAKPQ VFIVDYFFKS NLAEDFASAE IEVEVKLDSS QEMPKDKILD
310 320 330 340 350
NFVIEAALYD TESWYNSDGA ANLLSSQVAD IKINPSFDAI LGFLGYVLVG
360 370 380 390 400
KVEKPKLWSA EQPNLYILVL TLKDAFGHVV DCESCLVGIR QVSKAPKQLL
410 420 430 440 450
VNGQPVIIRG VNRHEHHPRI GKTNIESCMI KDLVLMKQNN INAVRNSHYP
460 470 480 490 500
QHPRWYELCD LFGMYMIDEA NIETHGFHLS GHIKHPTSEQ SWAIAMIDRV
510 520 530 540 550
IGMVERDKNH ACIISWSLGN EASYGPNHSA AAGWIRGKDT SRLVHYEGGG
560 570 580 590 600
SRTPSTDIVC PMYMRVWDIV KIANDPTELR PLILCEYSHA MGNSSGNICE
610 620 630 640 650
YWEAIDSTFG LQGGFIWDWV DQGLLKENTD GSKYWAYGGD FGDTPNDLNF
660 670 680 690 700
CLNGLTWPDR SPHPALHEVK YVYQPIKVSL KGSTLKITNT YFFETTQGLE
710 720 730 740 750
FSWAAHGDGH QLGSGILSLP LMKPQSSYDI ELESGPWYPL WASYSGEIFL
760 770 780 790 800
TVTAKLLHST PWVETGHVIS STQVQLPSRK EIIPHVIKAT DATLSSEILG
810 820 830 840 850
DTVRVSQQTF WEITLNIQTG TVESWKVEGV TIMNKGILPC FWRAPTDNDK
860 870 880 890 900
GGEENSYYSR WKAARIDNLE FLTKSCSIQE KTDHLVKIKA VYIGVPRDED
910 920 930 940 950
DSSQSSKQAL FEVDIIYEIF GSGDLIIECN VSPSSDLPPL PRVGVEFHLV
960 970 980 990 1000
ESVDHVRWYG KGPFECYPDR KAASHVGIYE KNVCDMHVPY IVPGECSGRA
1010 1020 1030 1040 1050
DVRWVTFQNK EGKGIFASMH GNSPPMQMSV SYYSTRELHR ARHNKELVRG
1060 1070 1080 1090 1100
NDIEVHLDHK HMGIGGDDSW SPCVHEKYLV PAVPYSFSIR LCPITAATSG
1110
LRIYEPEHQN
Length:1,110
Mass (Da):125,702
Last modified:March 24, 2009 - v1
Checksum:i41E8953F063F0DB9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
EQ973778 Genomic DNA. Translation: EEF49562.1.
RefSeqiXP_002513059.1. XM_002513013.1.

Genome annotation databases

GeneIDi8270882.
KEGGircu:RCOM_1452500.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
EQ973778 Genomic DNA. Translation: EEF49562.1.
RefSeqiXP_002513059.1. XM_002513013.1.

3D structure databases

ProteinModelPortaliB9RGA7.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi8270882.
KEGGircu:RCOM_1452500.

Phylogenomic databases

InParanoidiB9RGA7.
KOiK01190.

Family and domain databases

Gene3Di2.60.120.260. 2 hits.
2.60.40.320. 2 hits.
2.70.98.10. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR004199. B-gal_small/dom_5.
IPR011013. Gal_mutarotase_SF_dom.
IPR008979. Galactose-bd-like.
IPR014718. Glyco_hydro-type_carb-bd_sub.
IPR006101. Glyco_hydro_2.
IPR013812. Glyco_hydro_2/20_Ig-like.
IPR023232. Glyco_hydro_2_AS.
IPR023230. Glyco_hydro_2_CS.
IPR006102. Glyco_hydro_2_Ig-like.
IPR006104. Glyco_hydro_2_N.
IPR006103. Glyco_hydro_2_TIM.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamiPF02929. Bgal_small_N. 1 hit.
PF00703. Glyco_hydro_2. 1 hit.
PF02836. Glyco_hydro_2_C. 1 hit.
PF02837. Glyco_hydro_2_N. 1 hit.
[Graphical view]
PRINTSiPR00132. GLHYDRLASE2.
SMARTiSM01038. Bgal_small_N. 1 hit.
[Graphical view]
SUPFAMiSSF49303. SSF49303. 2 hits.
SSF49785. SSF49785. 1 hit.
SSF51445. SSF51445. 1 hit.
SSF74650. SSF74650. 1 hit.
PROSITEiPS00719. GLYCOSYL_HYDROL_F2_1. 1 hit.
PS00608. GLYCOSYL_HYDROL_F2_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. HaleImported.

Entry informationi

Entry nameiB9RGA7_RICCO
AccessioniPrimary (citable) accession number: B9RGA7
Entry historyi
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: January 7, 2015
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.