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B9RGA7 (B9RGA7_RICCO) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 30. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=3.2.1.23 EMBL EEF49562.1
Gene names
ORF Names:RCOM_1452500 EMBL EEF49562.1
OrganismRicinus communis (Castor bean) [Complete proteome]
Taxonomic identifier3988 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsMalpighialesEuphorbiaceaeAcalyphoideaeAcalypheaeRicinus

Protein attributes

Sequence length1110 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionGlycosidase EMBL EEF49562.1
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Cellular_componentbeta-galactosidase complex

Inferred from electronic annotation. Source: InterPro

   Molecular_functionbeta-galactosidase activity

Inferred from electronic annotation. Source: UniProtKB-EC

carbohydrate binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B9RGA7 [UniParc].

Last modified March 24, 2009. Version 1.
Checksum: 41E8953F063F0DB9

FASTA1,110125,702
        10         20         30         40         50         60 
MASLAANMVS PLETGHKVWE DPSFIKWRKR EPHVTLHCHE SVEGSLRYWY QRNKVDVLVS 

        70         80         90        100        110        120 
KSAVWNDDAV KAALDCAAFW VKDLPFVKSM SGFWKFFLAP SPTKVPIKFY EPAFQDFEWQ 

       130        140        150        160        170        180 
TLPVPSNWQM HGFDRPIYTN VVYPFPLDPP YVPEDNPTGC YRTYFQIPKE WQGRRILLHF 

       190        200        210        220        230        240 
EAVDSAFCAW VNGVPVGYSQ DSRLPAEFEI TEYCYSCDSG KSNVLAVQVI RWSDGSYLED 

       250        260        270        280        290        300 
QDHWWLSGIH RDVLLLAKPQ VFIVDYFFKS NLAEDFASAE IEVEVKLDSS QEMPKDKILD 

       310        320        330        340        350        360 
NFVIEAALYD TESWYNSDGA ANLLSSQVAD IKINPSFDAI LGFLGYVLVG KVEKPKLWSA 

       370        380        390        400        410        420 
EQPNLYILVL TLKDAFGHVV DCESCLVGIR QVSKAPKQLL VNGQPVIIRG VNRHEHHPRI 

       430        440        450        460        470        480 
GKTNIESCMI KDLVLMKQNN INAVRNSHYP QHPRWYELCD LFGMYMIDEA NIETHGFHLS 

       490        500        510        520        530        540 
GHIKHPTSEQ SWAIAMIDRV IGMVERDKNH ACIISWSLGN EASYGPNHSA AAGWIRGKDT 

       550        560        570        580        590        600 
SRLVHYEGGG SRTPSTDIVC PMYMRVWDIV KIANDPTELR PLILCEYSHA MGNSSGNICE 

       610        620        630        640        650        660 
YWEAIDSTFG LQGGFIWDWV DQGLLKENTD GSKYWAYGGD FGDTPNDLNF CLNGLTWPDR 

       670        680        690        700        710        720 
SPHPALHEVK YVYQPIKVSL KGSTLKITNT YFFETTQGLE FSWAAHGDGH QLGSGILSLP 

       730        740        750        760        770        780 
LMKPQSSYDI ELESGPWYPL WASYSGEIFL TVTAKLLHST PWVETGHVIS STQVQLPSRK 

       790        800        810        820        830        840 
EIIPHVIKAT DATLSSEILG DTVRVSQQTF WEITLNIQTG TVESWKVEGV TIMNKGILPC 

       850        860        870        880        890        900 
FWRAPTDNDK GGEENSYYSR WKAARIDNLE FLTKSCSIQE KTDHLVKIKA VYIGVPRDED 

       910        920        930        940        950        960 
DSSQSSKQAL FEVDIIYEIF GSGDLIIECN VSPSSDLPPL PRVGVEFHLV ESVDHVRWYG 

       970        980        990       1000       1010       1020 
KGPFECYPDR KAASHVGIYE KNVCDMHVPY IVPGECSGRA DVRWVTFQNK EGKGIFASMH 

      1030       1040       1050       1060       1070       1080 
GNSPPMQMSV SYYSTRELHR ARHNKELVRG NDIEVHLDHK HMGIGGDDSW SPCVHEKYLV 

      1090       1100       1110 
PAVPYSFSIR LCPITAATSG LRIYEPEHQN 

« Hide

References

[1]"Draft genome sequence of the oilseed species Ricinus communis."
Chan A.P., Crabtree J., Zhao Q., Lorenzi H., Orvis J., Puiu D., Melake-Berhan A., Jones K.M., Redman J., Chen G., Cahoon E.B., Gedil M., Stanke M., Haas B.J., Wortman J.R., Fraser-Liggett C.M., Ravel J., Rabinowicz P.D.
Nat. Biotechnol. 28:951-956(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Hale.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
EQ973778 Genomic DNA. Translation: EEF49562.1.
RefSeqXP_002513059.1. XM_002513013.1.

3D structure databases

ProteinModelPortalB9RGA7.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID8270882.
KEGGrcu:RCOM_1452500.

Phylogenomic databases

KOK01190.
ProtClustDBCLSN2690605.

Family and domain databases

Gene3D2.60.120.260. 2 hits.
2.60.40.320. 2 hits.
2.70.98.10. 1 hit.
3.20.20.80. 1 hit.
InterProIPR004199. B-gal_small/dom_5.
IPR011013. Gal_mutarotase_SF_dom.
IPR008979. Galactose-bd-like.
IPR014718. Glyco_hydro-type_carb-bd_sub.
IPR006101. Glyco_hydro_2.
IPR013812. Glyco_hydro_2/20_Ig-like.
IPR023232. Glyco_hydro_2_AS.
IPR023230. Glyco_hydro_2_CS.
IPR006102. Glyco_hydro_2_Ig-like.
IPR006104. Glyco_hydro_2_N.
IPR006103. Glyco_hydro_2_TIM.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamPF02929. Bgal_small_N. 1 hit.
PF00703. Glyco_hydro_2. 1 hit.
PF02836. Glyco_hydro_2_C. 1 hit.
PF02837. Glyco_hydro_2_N. 1 hit.
[Graphical view]
PRINTSPR00132. GLHYDRLASE2.
SMARTSM01038. Bgal_small_N. 1 hit.
[Graphical view]
SUPFAMSSF49303. SSF49303. 2 hits.
SSF49785. SSF49785. 1 hit.
SSF51445. SSF51445. 1 hit.
SSF74650. SSF74650. 1 hit.
PROSITEPS00719. GLYCOSYL_HYDROL_F2_1. 1 hit.
PS00608. GLYCOSYL_HYDROL_F2_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB9RGA7_RICCO
AccessionPrimary (citable) accession number: B9RGA7
Entry history
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: February 19, 2014
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)