B9RE34 (B9RE34_RICCO) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Histone deacetylase hda1, putative EMBL EEF50642.1

Gene names

ORF Names:

RCOM_1617710 EMBL EEF50642.1

Organism

Ricinus communis (Castor bean) [Complete proteome]

Taxonomic identifier

3988 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Euphyllophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › fabids › Malpighiales › Euphorbiaceae › Acalyphoideae › Acalypheae › Ricinus

Protein attributes

Sequence length	599 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Hydrolase SAAS SAAS000286
Technical term	Complete proteome
Gene Ontology (GO)
Cellular_component	intracellular Inferred from electronic annotation. Source: InterPro
Molecular_function	hydrolase activity Inferred from electronic annotation. Source: UniProtKB-KW zinc ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B9RE34 [UniParc]. Last modified March 24, 2009. Version 1. Checksum: C208ABCE76B6F0DC	FASTA	599	65,212
	10 20 30 40 50 60 MDNVCARNSL CKAIMVLGTL QTSRVMNKES EKSCHKRNHG ASCNGSNGKH EDLGTNGTSG 70 80 90 100 110 120 SCSYDESAGE EDTLTMHADA DGDTPSDVDV SRKKKQREMT FQGMYNVFDF DDDEDDSDWE 130 140 150 160 170 180 PVQKRLEIVK WFCTNCTMVN LDDVVHCDIC GEHKESGILK YGFFASPILE DTGLIEIETE 190 200 210 220 230 240 TKGRDKDGCS QQSSSSSNGC TAIGFDERML LHSEVEMKSH PHPERPDRLR AIAASLATAG 250 260 270 280 290 300 IFPGRCYPIS AREITQQELQ MVHSLEHIQA VEFTSHIFSS YFTPDTYANE HSAHAARLAA 310 320 330 340 350 360 GLCADIASAI VSARVKNGFA LVRPPGHHAG IRQAMGFCLH NNAAVAALAA QVAGAKKVLI 370 380 390 400 410 420 VDWDVHHGNG TQEIFEQNKS VLYISLHRHE GGKFYPGTGA ADEVGSKGAE GYCVNVPWGR 430 440 450 460 470 480 GGVGDSDYIF AFQHVVLPIA AEFAPDFTII SAGFDAARGD PLGCCDVTPA GYAQMTDMLY 490 500 510 520 530 540 NLCGGKLLVI LEGGYNLRSI SSSATAVIKV LLGEEGTTCE LGNIVPSKAG LQTVLEVLKI 550 560 570 580 590 QMNFWPSLGS IFEKLQLQWK NRLKRDAGLM RQCGGNGEER VYCIIFLVGI IMKDERDTD

References

[1]

"Draft genome sequence of the oilseed species Ricinus communis." Chan A.P., Crabtree J., Zhao Q., Lorenzi H., Orvis J., Puiu D., Melake-Berhan A., Jones K.M., Redman J., Chen G., Cahoon E.B., Gedil M., Stanke M., Haas B.J., Wortman J.R., Fraser-Liggett C.M., Ravel J., Rabinowicz P.D. Nat. Biotechnol. 28:951-956(2010) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Hale.

Cross-references

Sequence databases
EMBL GenBank DDBJ	EQ973775 Genomic DNA. Translation: EEF50642.1.
RefSeq	XP_002511973.1. XM_002511927.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	8286739.
KEGG	rcu:RCOM_1617710.
Phylogenomic databases
KO	K11407.
ProtClustDB	CLSN2688535.
Family and domain databases
Gene3D	3.40.800.20. 1 hit.
InterPro	IPR000286. His_deacetylse. IPR023801. His_deacetylse_dom. IPR001876. Znf_RanBP2. [Graphical view]
PANTHER	PTHR10625. PTHR10625. 1 hit.
Pfam	PF00850. Hist_deacetyl. 1 hit. [Graphical view]
PRINTS	PR01270. HDASUPER.
SMART	SM00547. ZnF_RBZ. 1 hit. [Graphical view]
PROSITE	PS01358. ZF_RANBP2_1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B9RE34_RICCO

Accession

Primary (citable) accession number: B9RE34

Entry history

Integrated into UniProtKB/TrEMBL:	March 24, 2009
Last sequence update:	March 24, 2009
Last modified:	March 6, 2013
This is version 21 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)