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B9RAW2

- B9RAW2_RICCO

UniProt

B9RAW2 - B9RAW2_RICCO

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Protein

Histone deacetylase

Gene
RCOM_1509350
Organism
Ricinus communis (Castor bean)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

Hydrolysis of an N(6)-acetyl-lysine residue of a histone to yield a deacetylated histone.UniRule annotation

GO - Molecular functioni

  1. NAD-dependent histone deacetylase activity (H3-K14 specific) Source: UniProtKB-EC
  2. NAD-dependent histone deacetylase activity (H3-K18 specific) Source: UniProtKB-EC
  3. NAD-dependent histone deacetylase activity (H3-K9 specific) Source: UniProtKB-EC
  4. NAD-dependent histone deacetylase activity (H4-K16 specific) Source: UniProtKB-EC

GO - Biological processi

  1. regulation of transcription, DNA-templated Source: UniProtKB-KW
  2. transcription, DNA-templated Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Chromatin regulatorUniRule annotation, HydrolaseUniRule annotationSAAS annotations

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Histone deacetylaseUniRule annotation (EC:3.5.1.98UniRule annotation)
Gene namesi
ORF Names:RCOM_1509350Imported
OrganismiRicinus communis (Castor bean)
Taxonomic identifieri3988 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsMalpighialesEuphorbiaceaeAcalyphoideaeAcalypheaeRicinus
ProteomesiUP000008311: Unassembled WGS sequence

Subcellular locationi

Nucleus By similarity UniRule annotation

GO - Cellular componenti

  1. nucleus Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

NucleusUniRule annotation

Structurei

3D structure databases

ProteinModelPortaliB9RAW2.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

KOiK06067.

Family and domain databases

Gene3Di3.40.800.20. 1 hit.
InterProiIPR000286. His_deacetylse.
IPR003084. His_deacetylse_1.
IPR023801. His_deacetylse_dom.
[Graphical view]
PANTHERiPTHR10625. PTHR10625. 1 hit.
PfamiPF00850. Hist_deacetyl. 1 hit.
[Graphical view]
PIRSFiPIRSF037913. His_deacetylse_1. 1 hit.
PRINTSiPR01270. HDASUPER.
PR01271. HISDACETLASE.

Sequencei

Sequence statusi: Complete.

B9RAW2-1 [UniParc]FASTAAdd to Basket

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MGDETGGASL PSTGTDAKKR RVTYFYEPTI GNYYYGQGHP MKPHRIRMAH    50
NLIVHYSLHR RMEINRPFPA STIDIRKFHS DDYVDFLSSV SPESLADPAH 100
NRHLKRFNVG EDCPVFDGLF GFCQASAGGS MGAAVKLNRG DADIALNWAG 150
GLHHAKKSEA SGFCYVNDIV LGILELLKVH RRVLYVDIDV HHGDGVEEAF 200
YTTDRVMTVS FHKFGDFFPG TGHIKDTGAG QGKNYALNIP LNDGMDDVSF 250
RALFRPIIQK VMEVYQPDAV VLQCGADSLT GDRLGCFNLS VKGHADCLRF 300
LRSFNVPLMV LGGGGYTIRN VARCWCYETA VAVGVEPDNK LPYNEYYEYF 350
GPDYTLHIDP SNMENLNSPK DMERIRNILL EQLSKLPNAP SVPFQTTPAI 400
TEVPEEGDEE MDRRPKRRIW DGEGYESPDE DEKPQPRRLN SDGLVAKDEM 450
RDHIDEMEED KKDVHPQC 468
Length:468
Mass (Da):52,640
Last modified:March 24, 2009 - v1
Checksum:i023FBF7ABA30135A
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
EQ973773 Genomic DNA. Translation: EEF51939.1.
RefSeqiXP_002511337.1. XM_002511291.1.

Genome annotation databases

GeneIDi8278303.
KEGGircu:RCOM_1509350.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
EQ973773 Genomic DNA. Translation: EEF51939.1 .
RefSeqi XP_002511337.1. XM_002511291.1.

3D structure databases

ProteinModelPortali B9RAW2.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 8278303.
KEGGi rcu:RCOM_1509350.

Phylogenomic databases

KOi K06067.

Family and domain databases

Gene3Di 3.40.800.20. 1 hit.
InterProi IPR000286. His_deacetylse.
IPR003084. His_deacetylse_1.
IPR023801. His_deacetylse_dom.
[Graphical view ]
PANTHERi PTHR10625. PTHR10625. 1 hit.
Pfami PF00850. Hist_deacetyl. 1 hit.
[Graphical view ]
PIRSFi PIRSF037913. His_deacetylse_1. 1 hit.
PRINTSi PR01270. HDASUPER.
PR01271. HISDACETLASE.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Hale.

Entry informationi

Entry nameiB9RAW2_RICCO
AccessioniPrimary (citable) accession number: B9RAW2
Entry historyi
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: May 14, 2014
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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