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Protein
Submitted name:

Elongation factor tu, putative

Gene

RCOM_1508490

Organism
Ricinus communis (Castor bean)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. GTPase activity Source: InterPro
  2. GTP binding Source: UniProtKB-KW
  3. sulfate adenylyltransferase (ATP) activity Source: UniProtKB-EC
  4. translation elongation factor activity Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Elongation factorImported, NucleotidyltransferaseImported, Transferase

Keywords - Biological processi

Protein biosynthesis

Keywords - Ligandi

GTP-bindingUniRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Submitted name:
Elongation factor tu, putativeImported (EC:2.7.7.4Imported)
Gene namesi
ORF Names:RCOM_1508490Imported
OrganismiRicinus communis (Castor bean)Imported
Taxonomic identifieri3988 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsMalpighialesEuphorbiaceaeAcalyphoideaeAcalypheaeRicinus
ProteomesiUP000008311 Componenti: Unassembled WGS sequence

Subcellular locationi

GO - Cellular componenti

  1. intracellular Source: InterPro
Complete GO annotation...

Structurei

3D structure databases

ProteinModelPortaliB9RAT6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

InParanoidiB9RAT6.
KOiK02358.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
HAMAPiMF_00118_B. EF_Tu_B.
InterProiIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamiPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSiPR00315. ELONGATNFCT.
SUPFAMiSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00231. small_GTP. 1 hit.
PROSITEiPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B9RAT6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAISASATVS TSSKLAYPHP SPSSTSSTFS FKPTNNLTPK TLLFSSFISP
60 70 80 90 100
FLTTTCSTST SSPTSTIRRR SFTVRAARGK FERKKPHVNI GTIGHVDHGK
110 120 130 140 150
TTLTAALTMA LAAMGNSAPK KYDEIDAAPE ERARGITINT ATVEYETENR
160 170 180 190 200
HYAHVDCPGH ADYVKNMITG AAQMDGAILV VSGADGPMPQ TKEHILLAKQ
210 220 230 240 250
VGVPNMVVFL NKQDQVDDEE LLQLVELEVR ELLSSYEFPG DDIPIISGSA
260 270 280 290 300
LLALEALMAN PSISRGENQW VDKIYELMDS VDSYIPIPQR QTDLPFLLAV
310 320 330 340 350
EDVFSITGRE KLGNTTVTGV EMFQKILDEA MAGDNVGLLL RGVQKVDIQR
360 370 380 390 400
GMVLSKPGTI TPHTKFSAIV YVLKKEEGGR HSPFFAGYRP QFYMRTTDVT
410 420 430 440 450
GKVTAIMNDK DEESKMVMPG DRVKMVVELI VPVACEQGMR FAIREGGKTV
460
GAGVIQSIIE
Length:460
Mass (Da):50,122
Last modified:March 24, 2009 - v1
Checksum:i3D0E4336588E0D2F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
EQ973773 Genomic DNA. Translation: EEF51913.1.
RefSeqiXP_002511311.1. XM_002511265.1.

Genome annotation databases

GeneIDi8278277.
KEGGircu:RCOM_1508490.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
EQ973773 Genomic DNA. Translation: EEF51913.1.
RefSeqiXP_002511311.1. XM_002511265.1.

3D structure databases

ProteinModelPortaliB9RAT6.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi8278277.
KEGGircu:RCOM_1508490.

Phylogenomic databases

InParanoidiB9RAT6.
KOiK02358.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
HAMAPiMF_00118_B. EF_Tu_B.
InterProiIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamiPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSiPR00315. ELONGATNFCT.
SUPFAMiSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00231. small_GTP. 1 hit.
PROSITEiPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. HaleImported.

Entry informationi

Entry nameiB9RAT6_RICCO
AccessioniPrimary (citable) accession number: B9RAT6
Entry historyi
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: January 7, 2015
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.