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B9RAR5 (B9RAR5_RICCO) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 14. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Copine, putative EMBL EEF51892.1
Gene names
ORF Names:RCOM_1508170 EMBL EEF51892.1
OrganismRicinus communis (Castor bean) [Complete proteome]
Taxonomic identifier3988 [NCBI]
Taxonomic lineageEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › fabids › Malpighiales › Euphorbiaceae › Acalyphoideae › Acalypheae › Ricinus

Protein attributes

Sequence length433 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   DomainZinc-finger RuleBase RU000353
   LigandMetal-binding
Zinc
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular functionzinc ion binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B9RAR5 [UniParc].

Last modified March 24, 2009. Version 1.
Checksum: 76669B8CC65399FA

FASTA43347,639
        10         20         30         40         50         60 
MGGRLSKRAS PRQASPSYSW SYQQPPYAQP GQEYMAYENY APAPQSYGGQ APNSGRRLER 

        70         80         90        100        110        120 
KYSKIDDNYN SLEQVTDALA RSGLESSNLI VGIDFTKSNE WTGARSFNRR SLHHIGDDQN 

       130        140        150        160        170        180 
PYEQAISIIG KTLSSFDEDN LIPCFGFGDA STHDQEVFSF NSDESFCNGF EEVLRRYREL 

       190        200        210        220        230        240 
VPHLRLAGPT SFAPIIEMAI TIVEQSGGQY HVLVIIADGQ VTRSVDTQHG QLSPQEKRTV 

       250        260        270        280        290        300 
EAIVKASEYP LSIILVGVGD GPWDMMKEFD DNIPARAFDN FQFVNFTEIM SKNVDRSKKE 

       310        320        330        340        350        360 
AEFALAALME IPSQYRATLE LSILGSTRGK AIDRIPLPPP QYGAATLSNS KPSRSSSFHP 

       370        380        390        400        410        420 
SAPSSGRYNA QAAGTAPAPP ASSTSDNHLC PICLTNAKDM AFGCGHQTCC DCGQDLQLCP 

       430 
ICRSSINTRI KLY

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References

[1]Chan A., Puiu D., Melake A., Orvis J., Zhao Q., Wortman J., Utterback T., Rosovitz M.J., Inman J.M., Amedeo P., Schobel S., Galinsky K., Fraser C., Ravel J., Rabinowicz P.
Submitted (OCT-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Hale.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		EQ973773 Genomic DNA. Translation: EEF51892.1.
RefSeqXP_002511290.1. XM_002511244.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID8278256.
KEGGrcu:RCOM_1508170.

Phylogenomic databases

PhylomeDBB9RAR5.
ProtClustDBCLSN2719345.

Family and domain databases

InterProIPR010734. Copine.
IPR002035. VWF_A.
IPR001841. Znf_RING.
IPR013083. Znf_RING/FYVE/PHD.
[Graphical view]
Gene3DG3DSA:3.30.40.10. Znf_RING/FYVE/PHD. 1 hit.
PfamPF07002. Copine. 1 hit.
[Graphical view]
SMARTSM00184. RING. 1 hit.
SM00327. VWA. 1 hit.
[Graphical view]
PROSITEPS50089. ZF_RING_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB9RAR5_RICCO
AccessionPrimary (citable) accession number: B9RAR5
Entry history
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: December 14, 2011
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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