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B9RA03 (B9RA03_RICCO) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=2.1.1.43 EMBL EEF51630.1
Gene names
ORF Names:RCOM_1502470 EMBL EEF51630.1
OrganismRicinus communis (Castor bean) [Complete proteome]
Taxonomic identifier3988 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsMalpighialesEuphorbiaceaeAcalyphoideaeAcalypheaeRicinus

Protein attributes

Sequence length631 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

S-adenosyl-L-methionine + L-lysine-[histone] = S-adenosyl-L-homocysteine + N(6)-methyl-L-lysine-[histone]. RuleBase RU004542

Subcellular location

Nucleus By similarity.

Sequence similarities

Contains 1 SET domain. RuleBase RU004538

Contains 1 pre-SET domain.

Contains SET domain. SAAS SAAS001214

Contains pre-SET domain. SAAS SAAS001214

Sequences

Sequence LengthMass (Da)Tools
B9RA03 [UniParc].

Last modified March 24, 2009. Version 1.
Checksum: 365A49F15508ECDA

FASTA63172,091
        10         20         30         40         50         60 
MHSSSKFERA RTAATLQFPR GCGSHDEIEV DPDENVNSFQ NLVPVKPPRK YVRKRSVEEF 

        70         80         90        100        110        120 
SPKQDFNPYC RNTDSGVDSK NKIFAERKFF EYKKQPLADN GRPLTNWSDE GPSTSRKKVK 

       130        140        150        160        170        180 
EVLKLFNETL KTLENEVKSK GKKSNICLHR KAAMVLGKNK WVNTAKRLGP VPGIEIGDRF 

       190        200        210        220        230        240 
HYRAELYVTG LHLQFLKGID YMKKDGILLA TSIVATDKYS NLMKSSDVLI YSGEGGNPKV 

       250        260        270        280        290        300 
QNPKIQPLRD QKLENGNLAL SNSMDQKRPV RVVLTESKRS KASIHTGSAR EKQNLGTGYF 

       310        320        330        340        350        360 
YDGLYFVENV SQERGEFGKL VFKFKLRRIP LQPERTSGFV IKSEKCKSIK DCRIVNDISE 

       370        380        390        400        410        420 
GKEKMPISVV NTVDDERPSQ FTYIACLGEQ IKSLSSGCDC TDRCSSFDNC SCISKNGQEI 

       430        440        450        460        470        480 
PYNDCKRLVR KRPCIYECGH FCKCSDSCPN RVCQLGIQLQ LEVFKTESKG WGVRSRSYIR 

       490        500        510        520        530        540 
AGSFICEYVG KIVQAEEACR RFGREDYLFD IGDNYDDRII RANHVPRLRN YEHLSLCKKD 

       550        560        570        580        590        600 
WGFMIDAGQR GNVGRFINHS CSPNLYVQNV LWDHHDRGIP HVMLFAKKDI PPWTELTYDY 

       610        620        630 
NCRLGDFRCM NGNVKAKNCM CKSPHCVGKF L 

« Hide

References

[1]"Draft genome sequence of the oilseed species Ricinus communis."
Chan A.P., Crabtree J., Zhao Q., Lorenzi H., Orvis J., Puiu D., Melake-Berhan A., Jones K.M., Redman J., Chen G., Cahoon E.B., Gedil M., Stanke M., Haas B.J., Wortman J.R., Fraser-Liggett C.M., Ravel J., Rabinowicz P.D.
Nat. Biotechnol. 28:951-956(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Hale.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
EQ973773 Genomic DNA. Translation: EEF51630.1.
RefSeqXP_002511028.1. XM_002510982.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID8289675.
KEGGrcu:RCOM_1502470.

Phylogenomic databases

KOK11420.

Family and domain databases

Gene3D2.30.280.10. 1 hit.
InterProIPR025794. Hist-Lys_N-MeTrfase_plant.
IPR007728. Pre-SET_dom.
IPR015947. PUA-like_domain.
IPR001214. SET_dom.
IPR003105. SRA_YDG.
[Graphical view]
PfamPF05033. Pre-SET. 1 hit.
PF02182. SAD_SRA. 1 hit.
PF00856. SET. 1 hit.
[Graphical view]
SMARTSM00317. SET. 1 hit.
[Graphical view]
SUPFAMSSF88697. SSF88697. 1 hit.
PROSITEPS50867. PRE_SET. 1 hit.
PS51575. SAM_MT43_SUVAR39_2. 1 hit.
PS50280. SET. 1 hit.
PS51015. YDG. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB9RA03_RICCO
AccessionPrimary (citable) accession number: B9RA03
Entry history
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: June 11, 2014
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)