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B9R7C6

- B9R7C6_RICCO

UniProt

B9R7C6 - B9R7C6_RICCO

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Protein

Alpha-amylase

Gene

RCOM_1590660

Organism
Ricinus communis (Castor bean)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

GO - Molecular functioni

  1. alpha-amylase activity Source: UniProtKB-EC
  2. calcium ion binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotationImported, Hydrolase

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Gene namesi
ORF Names:RCOM_1590660Imported
OrganismiRicinus communis (Castor bean)Imported
Taxonomic identifieri3988 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsMalpighialesEuphorbiaceaeAcalyphoideaeAcalypheaeRicinus
ProteomesiUP000008311: Unassembled WGS sequence

Structurei

3D structure databases

ProteinModelPortaliB9R7C6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Phylogenomic databases

InParanoidiB9R7C6.
KOiK01176.

Family and domain databases

Gene3Di1.25.40.10. 3 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR012850. A-amylase_bs_C.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR002885. Pentatricopeptide_repeat.
IPR011990. TPR-like_helical_dom.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF07821. Alpha-amyl_C2. 1 hit.
PF00128. Alpha-amylase. 1 hit.
PF01535. PPR. 3 hits.
PF13041. PPR_2. 2 hits.
PF13812. PPR_3. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiSM00810. Alpha-amyl_C2. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
TIGRFAMsiTIGR00756. PPR. 5 hits.
PROSITEiPS51375. PPR. 13 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B9R7C6-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MNRRKSIEIL FWLFLLSIFP LSTSSALLFQ GFNWESCNKG GGWYNLLKNS
60 70 80 90 100
ILDIANAGIT HVWLPPPSQS VSPQGYMPGR LYDLNASRYG TQDELKSLIR
110 120 130 140 150
AFHHKGIKCL ADIVINHRTA EKKDERGIWC IFEGGTDDDR LDWGPSFICC
160 170 180 190 200
DDTVFSDGTG NPDTGEDYPP APDIDHLNPR VQKELSDWMN WLKLEIGFGG
210 220 230 240 250
WRFDFAKGYS PTIMKIYMEQ IPPGFAVGEK WDSLSYGQDW KPDYNQDAHR
260 270 280 290 300
NALKDWIQAS GGVITAFDFT TKGILQAAVQ GELWRLIDSN GNPPGLIGIM
310 320 330 340 350
PQNAVTFIDN HDTGSTQQLW PFPSDKVMQG YAYILTHPGI PTIFYDHFFD
360 370 380 390 400
WGLKEQISKL ASIRKNYGID SRSGMKILAA ESDLYMAAIN DNVIMKIGPR
410 420 430 440 450
MDLGNLLPSK EFQVATSGES YAVWVKNGWM NFLEERSYSM KSQRPNLAPK
460 470 480 490 500
GSNSLDANTE AIQIQNHLIK RGIDQFVYVS TALLDLYMKL GRVSYAHNAF
510 520 530 540 550
DYMPIRDVVS WNALICGYSR NGYDFSALEL FVQMLKLGFC PRQTTLVGLL
560 570 580 590 600
PSCGQLELVF QGKSIHGFGI KSGLHLDPQV KNALTSMYAK CGDLEAAEYL
610 620 630 640 650
FEEMMDKSVV SWNTMIGAYG QNGFFDEAMF VFKRMIGAGV EVSQVTIMSL
660 670 680 690 700
PSANANPESI HCYTIKVGLA DDASVVTSLI CMYARYGSTD HAELLYWSLP
710 720 730 740 750
QKNLVSLTAI ITSYAEAGNL GLVMESFSQM HQLNMKPDSV AMLSILHGIA
760 770 780 790 800
DPVHICIGHV FHGYAIKSGL DTFNLVTNGL ISMYSKFNNV EALFGLFSGM
810 820 830 840 850
HEKPLISWNS VISGCVQAGR ASHAIELFCQ MKMHGCNPDA ITIASLLSGC
860 870 880 890 900
SQLGYLQFGE RLHSYILRNK LEMEDFVGTA LIHMYTKCGS IVHAERVFKS
910 920 930 940 950
IGKPCLATWN AMISGYSCYG FEHKALTCYS EMQEQGVEPD KITFLGVLAA
960 970 980 990 1000
CTHGGLIHEG RRYFQIMTKV YDMVPTLQHC ACMVGLLARV GLFEEALLFI
1010 1020 1030 1040 1050
KNMEKEPDSA VWGAFLSACC IHQEVKLGEY LAKKLYLLDC RNGGLYVLMS
1060 1070 1080 1090 1100
NLYAVTGRWD DVARVREMMK DAGGDGNSGW KLLMSNDEIR GHNNWVLINF
1110
STKTEIRESK FTF
Length:1,113
Mass (Da):124,439
Last modified:March 24, 2009 - v1
Checksum:iDCA6071ED61C362E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
EQ973772 Genomic DNA. Translation: EEF52406.1.
RefSeqiXP_002510219.1. XM_002510173.1.

Genome annotation databases

GeneIDi8278872.
KEGGircu:RCOM_1590660.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
EQ973772 Genomic DNA. Translation: EEF52406.1 .
RefSeqi XP_002510219.1. XM_002510173.1.

3D structure databases

ProteinModelPortali B9R7C6.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 8278872.
KEGGi rcu:RCOM_1590660.

Phylogenomic databases

InParanoidi B9R7C6.
KOi K01176.

Family and domain databases

Gene3Di 1.25.40.10. 3 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProi IPR012850. A-amylase_bs_C.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR002885. Pentatricopeptide_repeat.
IPR011990. TPR-like_helical_dom.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF07821. Alpha-amyl_C2. 1 hit.
PF00128. Alpha-amylase. 1 hit.
PF01535. PPR. 3 hits.
PF13041. PPR_2. 2 hits.
PF13812. PPR_3. 1 hit.
[Graphical view ]
PRINTSi PR00110. ALPHAAMYLASE.
SMARTi SM00810. Alpha-amyl_C2. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 1 hit.
TIGRFAMsi TIGR00756. PPR. 5 hits.
PROSITEi PS51375. PPR. 13 hits.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. HaleImported.

Entry informationi

Entry nameiB9R7C6_RICCO
AccessioniPrimary (citable) accession number: B9R7C6
Entry historyi
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: October 29, 2014
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3