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B9R7C6

- B9R7C6_RICCO

UniProt

B9R7C6 - B9R7C6_RICCO

Protein

Alpha-amylase

Gene

RCOM_1590660

Organism
Ricinus communis (Castor bean)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 34 (01 Oct 2014)
      Sequence version 1 (24 Mar 2009)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

    GO - Molecular functioni

    1. alpha-amylase activity Source: UniProtKB-EC
    2. calcium ion binding Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: UniProtKB-KW

    Keywords - Molecular functioni

    GlycosidaseUniRule annotationImported, Hydrolase

    Keywords - Biological processi

    Carbohydrate metabolismUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
    Gene namesi
    ORF Names:RCOM_1590660Imported
    OrganismiRicinus communis (Castor bean)Imported
    Taxonomic identifieri3988 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsMalpighialesEuphorbiaceaeAcalyphoideaeAcalypheaeRicinus
    ProteomesiUP000008311: Unassembled WGS sequence

    Structurei

    3D structure databases

    ProteinModelPortaliB9R7C6.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 13 family.UniRule annotation

    Phylogenomic databases

    KOiK01176.

    Family and domain databases

    Gene3Di1.25.40.10. 3 hits.
    2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProiIPR012850. A-amylase_bs_C.
    IPR006046. Alpha_amylase.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    IPR002885. Pentatricopeptide_repeat.
    IPR011990. TPR-like_helical.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF07821. Alpha-amyl_C2. 1 hit.
    PF00128. Alpha-amylase. 1 hit.
    PF01535. PPR. 3 hits.
    PF13041. PPR_2. 2 hits.
    PF13812. PPR_3. 1 hit.
    [Graphical view]
    PRINTSiPR00110. ALPHAAMYLASE.
    SMARTiSM00810. Alpha-amyl_C2. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 1 hit.
    TIGRFAMsiTIGR00756. PPR. 5 hits.
    PROSITEiPS51375. PPR. 13 hits.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    B9R7C6-1 [UniParc]FASTAAdd to Basket

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    MNRRKSIEIL FWLFLLSIFP LSTSSALLFQ GFNWESCNKG GGWYNLLKNS     50
    ILDIANAGIT HVWLPPPSQS VSPQGYMPGR LYDLNASRYG TQDELKSLIR 100
    AFHHKGIKCL ADIVINHRTA EKKDERGIWC IFEGGTDDDR LDWGPSFICC 150
    DDTVFSDGTG NPDTGEDYPP APDIDHLNPR VQKELSDWMN WLKLEIGFGG 200
    WRFDFAKGYS PTIMKIYMEQ IPPGFAVGEK WDSLSYGQDW KPDYNQDAHR 250
    NALKDWIQAS GGVITAFDFT TKGILQAAVQ GELWRLIDSN GNPPGLIGIM 300
    PQNAVTFIDN HDTGSTQQLW PFPSDKVMQG YAYILTHPGI PTIFYDHFFD 350
    WGLKEQISKL ASIRKNYGID SRSGMKILAA ESDLYMAAIN DNVIMKIGPR 400
    MDLGNLLPSK EFQVATSGES YAVWVKNGWM NFLEERSYSM KSQRPNLAPK 450
    GSNSLDANTE AIQIQNHLIK RGIDQFVYVS TALLDLYMKL GRVSYAHNAF 500
    DYMPIRDVVS WNALICGYSR NGYDFSALEL FVQMLKLGFC PRQTTLVGLL 550
    PSCGQLELVF QGKSIHGFGI KSGLHLDPQV KNALTSMYAK CGDLEAAEYL 600
    FEEMMDKSVV SWNTMIGAYG QNGFFDEAMF VFKRMIGAGV EVSQVTIMSL 650
    PSANANPESI HCYTIKVGLA DDASVVTSLI CMYARYGSTD HAELLYWSLP 700
    QKNLVSLTAI ITSYAEAGNL GLVMESFSQM HQLNMKPDSV AMLSILHGIA 750
    DPVHICIGHV FHGYAIKSGL DTFNLVTNGL ISMYSKFNNV EALFGLFSGM 800
    HEKPLISWNS VISGCVQAGR ASHAIELFCQ MKMHGCNPDA ITIASLLSGC 850
    SQLGYLQFGE RLHSYILRNK LEMEDFVGTA LIHMYTKCGS IVHAERVFKS 900
    IGKPCLATWN AMISGYSCYG FEHKALTCYS EMQEQGVEPD KITFLGVLAA 950
    CTHGGLIHEG RRYFQIMTKV YDMVPTLQHC ACMVGLLARV GLFEEALLFI 1000
    KNMEKEPDSA VWGAFLSACC IHQEVKLGEY LAKKLYLLDC RNGGLYVLMS 1050
    NLYAVTGRWD DVARVREMMK DAGGDGNSGW KLLMSNDEIR GHNNWVLINF 1100
    STKTEIRESK FTF 1113
    Length:1,113
    Mass (Da):124,439
    Last modified:March 24, 2009 - v1
    Checksum:iDCA6071ED61C362E
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    EQ973772 Genomic DNA. Translation: EEF52406.1.
    RefSeqiXP_002510219.1. XM_002510173.1.

    Genome annotation databases

    GeneIDi8278872.
    KEGGircu:RCOM_1590660.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    EQ973772 Genomic DNA. Translation: EEF52406.1 .
    RefSeqi XP_002510219.1. XM_002510173.1.

    3D structure databases

    ProteinModelPortali B9R7C6.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 8278872.
    KEGGi rcu:RCOM_1590660.

    Phylogenomic databases

    KOi K01176.

    Family and domain databases

    Gene3Di 1.25.40.10. 3 hits.
    2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProi IPR012850. A-amylase_bs_C.
    IPR006046. Alpha_amylase.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    IPR002885. Pentatricopeptide_repeat.
    IPR011990. TPR-like_helical.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF07821. Alpha-amyl_C2. 1 hit.
    PF00128. Alpha-amylase. 1 hit.
    PF01535. PPR. 3 hits.
    PF13041. PPR_2. 2 hits.
    PF13812. PPR_3. 1 hit.
    [Graphical view ]
    PRINTSi PR00110. ALPHAAMYLASE.
    SMARTi SM00810. Alpha-amyl_C2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 1 hit.
    TIGRFAMsi TIGR00756. PPR. 5 hits.
    PROSITEi PS51375. PPR. 13 hits.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. HaleImported.

    Entry informationi

    Entry nameiB9R7C6_RICCO
    AccessioniPrimary (citable) accession number: B9R7C6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 24, 2009
    Last sequence update: March 24, 2009
    Last modified: October 1, 2014
    This is version 34 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3