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B9P7Z1 (B9P7Z1_POPTR) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 17. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Predicted protein EMBL EEE76672.1
Gene names
ORF Names:POPTRDRAFT_680508 EMBL EEE76672.1
OrganismPopulus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) [Complete proteome]
Taxonomic identifier3694 [NCBI]
Taxonomic lineageEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › fabids › Malpighiales › Salicaceae › Saliceae › Populus

Protein attributes

Sequence length325 AA.
Sequence statusComplete.
Protein existenceInferred from homology

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processfatty acid biosynthetic process

Inferred from electronic annotation. Source: InterPro

   Molecular function3-oxoacyl-[acyl-carrier-protein] synthase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B9P7Z1 [UniParc].

Last modified March 24, 2009. Version 1.
Checksum: 912B73B2FCAAB49C

FASTA32534,075
        10         20         30         40         50         60 
MRRYARITGT GSYLPPRRLT NHDLAAELAQ RGIETSDEWI VERTGIHARH FAAPDVASSD 

        70         80         90        100        110        120 
LALEASKKAL EAAGCQPQDI DLIIVATSTP DMVFPSTACI LQNKLGANGC AAFDVQAVCS 

       130        140        150        160        170        180 
GFVYALTVAD AMIQSGAASR ALVVGSEVFS RILDFNDRTT CVLFGDGAGA VVLEASEQPG 

       190        200        210        220        230        240 
ILASDLHADG KHVGILCVPG NVSGGQVLGD PLLKMDGQAV FKLAVGVLEK AARATLDKAG 

       250        260        270        280        290        300 
LTDADIDWLI PHQANIRIMQ STARKLKLSM DKVVVTVDQH GNTSAASIPL ALDHGVRNGQ 

       310        320 
VKPGQTVLLE GVGGGFTWGA VLLKM

« Hide

References

[1]"The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)."
Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I., Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W., Brun A. expand/collapse author list , Brunner A., Busov V., Campbell M., Carlson J., Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M., Couturier J., Covert S., Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S.
Science 313:1596-1604(2006) [PubMed: 16973872] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nisqually.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		EQ136747 Genomic DNA. Translation: EEE76672.1.

3D structure databases

ProteinModelPortalB9P7Z1.
SMRB9P7Z1. Positions 4-325.
ModBaseSearch...

Protein-protein interaction databases

STRINGB9P7Z1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Phylogenomic databases

OMACSSDLGL.

Family and domain databases

HAMAPMF_01815. FabH.
[Tree]
InterProIPR013751. ACP_syn_III.
IPR013747. ACP_syn_III_C.
IPR004655. FabH_synth.
IPR016039. Thiolase-like.
IPR016038. Thiolase-like_subgr.
[Graphical view]
Gene3DG3DSA:3.40.47.10. Thiolase-like_subgr. 2 hits.
PfamPF08545. ACP_syn_III. 1 hit.
PF08541. ACP_syn_III_C. 1 hit.
[Graphical view]
SUPFAMSSF53901. Thiolase-like. 1 hit.
TIGRFAMsTIGR00747. FabH. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB9P7Z1_POPTR
AccessionPrimary (citable) accession number: B9P7Z1
Entry history
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: December 14, 2011
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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