B9P7X4 (B9P7X4_POPTR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Predicted protein EMBL EEE76384.1

Gene names

ORF Names:

POPTRDRAFT_793448 EMBL EEE76384.1

Organism

Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) [Reference proteome]

Taxonomic identifier

3694 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Euphyllophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › fabids › Malpighiales › Salicaceae › Saliceae › Populus

Protein attributes

Sequence length	439 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	recognition of pollen Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B9P7X4 [UniParc]. Last modified March 24, 2009. Version 1. Checksum: CAC85BFC4B15FD58	FASTA	439	49,644
	10 20 30 40 50 60 MDTLSSMLII IANLLLLFSR FCNTANTLTL SQSIRDGGTR TLVSKDGSFE LGFFSPGSSR 70 80 90 100 110 120 NRYVGIWYKN IPVRTVVWVA NRNNPINDSS GFLMLDNTGN FVLVSNNNST VVWSSNSKKA 130 140 150 160 170 180 AQSAMGELQD SGNLVLRDEK DDNSGIYLWQ SFDYPSDTLL PGMKLGWDLR IGLDRRLSAW 190 200 210 220 230 240 KSPDDPSSGD FTWGTQLQSN PELVMWKGSK KYYRSGPWNG IGFSGGLALR INPVFYFDFV 250 260 270 280 290 300 DDGEEVYYTY NLKNKSLITR IVMNQTTYFR QRYTWNEINQ TWVLYATVPR DYCDTYNLCG 310 320 330 340 350 360 AYGNCIMSQS PVCQCLEKFT PRSPESWNSM DWSKGCVRNK PLDCQKGDGF VKYVGLKLPD 370 380 390 400 410 420 ATNSWVNKTM NLKECRSKCL QNCSCMAYTA TNIKERSGCA VWFGDLIDIR QFPAAGQEIY 430 IRMNASESSE CLSLVLVNP

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)." Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I., Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W., Brun A. , Brunner A., Busov V., Campbell M., Carlson J., Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M., Couturier J., Covert S., Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S. Science 313:1596-1604(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Nisqually.
[2]	US DOE Joint Genome Institute (JGI-PGF) Grigoriev I.V., Terry A., Salamov A.A., Otillar R., Lou Y., Lucas S., Hammon N., Glavina del Rio T., Detter J., Kalin E., Tice H., Pitluck S., Chapman J., Putnam N.H., Brunner A., Busov V., Campbell M., Chalot M. , Covert S., Davis J., DiFazio S., Gribskov M., Gunter L., Hamberger B., Jansson S., Joshi C., Larimer F., Martin F., Napoli C., Nelson D., Ralph S., Rombauts S., Rouze P., Schrader J., Tsai C., Vahala J., Tuskan G., Rokhsar D. Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases Cited for: GENOME REANNOTATION. Strain: cv. Nisqually.

Cross-references

Sequence databases
EMBL GenBank DDBJ	EQ136634 Genomic DNA. Translation: EEE76384.1.
RefSeq	XP_002337099.1. XM_002337059.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7461116.
KEGG	pop:POPTR_793448.
Phylogenomic databases
eggNOG	NOG283800.
HOGENOM	HOG000116559.
ProtClustDB	CLSN2719688.
Family and domain databases
Gene3D	2.90.10.10. 1 hit.
InterPro	IPR001480. Bulb-type_lectin_dom. IPR000742. EG-like_dom. IPR013227. PAN-2_domain. IPR003609. Pan_app. IPR000858. S_locus_glycoprot. [Graphical view]
Pfam	PF01453. B_lectin. 1 hit. PF08276. PAN_2. 1 hit. PF00954. S_locus_glycop. 1 hit. [Graphical view]
SMART	SM00108. B_lectin. 1 hit. SM00473. PAN_AP. 1 hit. [Graphical view]
SUPFAM	SSF51110. B_lectin. 1 hit.
PROSITE	PS50927. BULB_LECTIN. 1 hit. PS50026. EGF_3. 1 hit. PS50948. PAN. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B9P7X4_POPTR

Accession

Primary (citable) accession number: B9P7X4

Entry history

Integrated into UniProtKB/TrEMBL:	March 24, 2009
Last sequence update:	March 24, 2009
Last modified:	March 6, 2013
This is version 24 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)