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B9P7E8 (B9P7E8_POPTR) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 19. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Predicted protein EMBL EEE75523.1
Gene names
ORF Names:POPTRDRAFT_594281 EMBL EEE75523.1
OrganismPopulus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) [Complete proteome]
Taxonomic identifier3694 [NCBI]
Taxonomic lineageEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › fabids › Malpighiales › Salicaceae › Saliceae › Populus

Protein attributes

Sequence length607 AA.
Sequence statusComplete.
Protein existenceInferred from homology

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processglyoxylate cycle

Inferred from electronic annotation. Source: InterPro

   Molecular functionmalate synthase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B9P7E8 [UniParc].

Last modified March 24, 2009. Version 1.
Checksum: 3C9B382B6A862A30

FASTA60764,667
        10         20         30         40         50         60 
MTDRTQAHSL QVATELHRFI NEQVLPGTGV ASEAFWKGFD AIVNDLAPRN AALLAERDRL 

        70         80         90        100        110        120 
QTELDTWHKA HPGPITDMAG YQQFLTQIGY LVEQPKDAKA TTTNVDAELA IQAGPQLVVP 

       130        140        150        160        170        180 
ILNARYALNA ANARWGSLYD ALYGTDAIGE DGGAEKGKGY NPVRGAKVIA FARDFLDQAA 

       190        200        210        220        230        240 
PLASGSHKDA AGYRVEAGQL VVALKSGGTT GLKNTAQFVG YQGDAAAPSS VLLLNNGLHI 

       250        260        270        280        290        300 
DIRIDKTTAI GQTDAAGVAD VVVEAALSTI LDLEDSVAAV DAEDKVVGYA NWLGILKGTL 

       310        320        330        340        350        360 
TETFDKGGKS MTRGLNADRE YTGADGKPVK LHGRSLMFVR NVGHLMTNPA ILWGNGKEIP 

       370        380        390        400        410        420 
EGILDAMVTT AIAVHDIKGL GANGIRNSRT GSVYIVKPKM HGPAEAAFAS ELFGRVEKVL 

       430        440        450        460        470        480 
GLPENTVKLG IMDEERRTSV NLKACIAAAA SRVAFINTGF LDRTGDEMHT AMYAGPMVRK 

       490        500        510        520        530        540 
ADMKGSAWLA AYERSNVLVG LGLGLRGKAQ IGKGMWAMPD LMKAMLEQKI GHPKAGANTA 

       550        560        570        580        590        600 
WVPSPTAATL HALHYHQVNV AEVQKQLEQT NADAERATIL ADLLQVPVVK EDKAWAAPRC 


PTSTTWA

« Hide

References

[1]"The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)."
Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I., Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W., Brun A. expand/collapse author list , Brunner A., Busov V., Campbell M., Carlson J., Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M., Couturier J., Covert S., Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S.
Science 313:1596-1604(2006) [PubMed: 16973872] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nisqually.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		EQ135907 Genomic DNA. Translation: EEE75523.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGB9P7E8.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Phylogenomic databases

OMAENANWSV.

Family and domain databases

HAMAPMF_00641. Malate_synth_G.
[Tree]
InterProIPR011076. Malate_synth-like.
IPR023310. Malate_synth_G_beta_sub_dom.
IPR001465. Malate_synthase.
IPR006253. Malate_synthG.
[Graphical view]
Gene3DG3DSA:2.170.170.11. Malate_synth_G_beta_sub_dom. 2 hits.
PfamPF01274. Malate_synthase. 1 hit.
[Graphical view]
SUPFAMSSF51645. Malat_synth_like. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB9P7E8_POPTR
AccessionPrimary (citable) accession number: B9P7E8
Entry history
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: December 14, 2011
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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