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B9NEA0 (B9NEA0_POPTR) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 8. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Predicted protein EMBL EEE75894.1
Gene names
ORF Names:POPTRDRAFT_594744 EMBL EEE75894.1
OrganismPopulus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) [Complete proteome]
Taxonomic identifier3694 [NCBI]
Taxonomic lineageEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › fabids › Malpighiales › Salicaceae › Saliceae › Populus

Protein attributes

Sequence length480 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processcell death

Inferred from electronic annotation. Source: InterPro

   Cellular componentintegral to membrane

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B9NEA0 [UniParc].

Last modified March 24, 2009. Version 1.
Checksum: ED4F3F514025F7C2

FASTA48055,077
        10         20         30         40         50         60 
MAEGGTTLEY TPTWVVAVVC SVIVLISLIV ERTLHYLGKL LKRKHQKPLF EALQKIKEEL 

        70         80         90        100        110        120 
MLLGFISLLL TVFQGRINTI CISKDLSKKV LPAKDESKEP LLPIFRLSFP SFLGKVPMLS 

       130        140        150        160        170        180 
TTALHHLHIF IFVLACVHVV FCVLTILFGS ARIRQWKLWE DSISKKEQDP EEAQGPKFTH 

       190        200        210        220        230        240 
VKDHDFIKSR YLGFGKNSYI LGWVHSFFKQ FYASVTRSDY TTLRLGFIMT HCRGNPKFDF 

       250        260        270        280        290        300 
HKYMMRVLEA DFKKVVGISW YLWLFVVIFL FLNVSGWHAY FWIAFIPFIL LLAVGTKLEH 

       310        320        330        340        350        360 
VIIQLAHEVA EKHVAVQGDL VVRPSDDHFW FNKPKIVLLL IHIILFQNSF ELAFFFWIWV 

       370        380        390        400        410        420 
QYGFDSCIMG QVGYIIPRLV IGAFVQFLCS YSTLPLYAIV TQMGSSFKRE IFEEHIQEGL 

       430        440        450        460        470        480 
VGWAKQAKKK AGLRRDANES SHNQVGPKEE SPLIQMAKAG SRETAVEENK SGEIIHGTAS

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References

[1]"The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)."
Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I., Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W., Brun A. expand/collapse author list , Brunner A., Busov V., Campbell M., Carlson J., Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M., Couturier J., Covert S., Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S.
Science 313:1596-1604(2006) [PubMed: 16973872] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nisqually.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		DS017806 Genomic DNA. Translation: EEE75894.1.
RefSeqXP_002333585.1. XM_002333548.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7455096.
KEGGpop:POPTR_594744.

Phylogenomic databases

ProtClustDBCLSN2716977.

Family and domain databases

InterProIPR004326. Mlo.
[Graphical view]
PfamPF03094. Mlo. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB9NEA0_POPTR
AccessionPrimary (citable) accession number: B9NEA0
Entry history
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: December 14, 2011
This is version 8 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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