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B9N6J9 (B9N6J9_POPTR) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Predicted protein EMBL EEF09817.1
Gene names
ORF Names:POPTRDRAFT_583307 EMBL EEF09817.1
OrganismPopulus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) [Complete proteome]
Taxonomic identifier3694 [NCBI]
Taxonomic lineageEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › fabids › Malpighiales › Salicaceae › Saliceae › Populus

Protein attributes

Sequence length457 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence LengthMass (Da)Tools
B9N6J9 [UniParc].

Last modified March 24, 2009. Version 1.
Checksum: E66445860D63CBDA

FASTA45750,028
        10         20         30         40         50         60 
MRNDVENDDD DDSYPKPVGR RCVFYYGVGH MLNDITAACW FTYLLLFLTE IGLSPRDAAI 

        70         80         90        100        110        120 
AMLAGQIADG FATVFAGELI DRFGHFKVWH GAGSILVAIS FSSVFGGCLP CKILASCSSV 

       130        140        150        160        170        180 
VETVSYSTSA AIFNVGWAAT QVSHMSMVNC ISLNSSSRVV MTSCRNAFTM VANLSLYAVA 

       190        200        210        220        230        240 
LVVFSSIKAT THADIENQYR WIAYTSIFIG CCFVGIFHLG TKEPRLKICV HGTSNARISW 

       250        260        270        280        290        300 
AYWFKKVLYY QVGLVYMLTR LVQNVSQVYL AFYVMDDLQM AKSAKALVPA IIYMSSFFVS 

       310        320        330        340        350        360 
VIMQEMSWTG QRLKAYYSAG GILWVFCGAG ILFLPRNMSA FMYVISVLIG IANALMTVTG 

       370        380        390        400        410        420 
VSMQSILVGS DLNGCAFVYG SLSFLDKISC GLAVFALQSF QSSSPKTEEA LSTDYFSVTR 

       430        440        450 
YGLGLLPAVC SLAGVAITYT MKLQTQDSKS LMEPLLE

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References

[1]"The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)."
Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I., Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W., Brun A. expand/collapse author list , Brunner A., Busov V., Campbell M., Carlson J., Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M., Couturier J., Covert S., Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S.
Science 313:1596-1604(2006) [PubMed: 16973872] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nisqually.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		DS017306 Genomic DNA. Translation: EEF09817.1.
RefSeqXP_002330864.1. XM_002330828.1.
UniGenePth.9349.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7489030.
KEGGpop:POPTR_583307.

Phylogenomic databases

GeneTreeEPGT00050000015540.
OMAANALMTV.
ProtClustDBCLSN2693570.

Family and domain databases

InterProIPR016196. MFS_dom_general_subst_transpt.
[Graphical view]
SUPFAMSSF103473. MFS_gen_substrate_transporter. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB9N6J9_POPTR
AccessionPrimary (citable) accession number: B9N6J9
Entry history
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: December 14, 2011
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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