Skip Header

Contribute Send feedback
Read comments (?) or add your own

B9N631 (B9N631_POPTR) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 29. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesSubmitted name:
Predicted protein EMBL EEF09626.1
Gene names
ORF Names:POPTRDRAFT_745223 EMBL EEF09626.1
OrganismPopulus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) [Reference proteome]
Taxonomic identifier3694 [NCBI]
Taxonomic lineageEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › fabids › Malpighiales › Salicaceae › Saliceae › Populus

Protein attributes

Sequence length957 AA.
Sequence statusComplete.
Protein existenceInferred from homology

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processcarbon fixation

Inferred from electronic annotation. Source: InterPro

tricarboxylic acid cycle

Inferred from electronic annotation. Source: InterPro

   Cellular_componentapoplast

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

cytosol

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

   Molecular_functionphosphoenolpyruvate carboxylase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B9N631 [UniParc].

Last modified March 24, 2009. Version 1.
Checksum: 42E3FDAAFDF145DD

FASTA957109,487
        10         20         30         40         50         60 
MASIDAQLRL LAPGKVSEDD KLIEYDALLL DRFLDILQDL HGEDLKETVQ ECYELSAEYE 

        70         80         90        100        110        120 
GKHDPKKLEE LGSVLTSLDP GDSIVIAKSF SHMLNLANLA EEVQIAYRRR NKLKKGDFAD 

       130        140        150        160        170        180 
ENNATTESDI EETLKRLVSE MKKSPEEVFD ALKNQTVELV FTAHPTQSVR RSLLQKHARI 

       190        200        210        220        230        240 
RNCLAQLYAK DITPDDKQEL DEALQREIQA AFRTDEIRRT PPTPQDEMRA GMSYFHETIW 

       250        260        270        280        290        300 
KGVPKFLRRV DTALKNIGIN ERVPYNAPLI QFSSWMGGDR DGNPRVTPEV TRDVCLLARM 

       310        320        330        340        350        360 
MAANLYYSQI EDLMFELSMW RCSDELRLRA DELHRSSKRD AKHYIEFWKQ IPPNEPYRVI 

       370        380        390        400        410        420 
LGELRDKLYQ TRERSRQLLS HGISEIPEEA TFINVEQFLE PLELCYRSLC SCGDRTIADG 

       430        440        450        460        470        480 
SLLDFLRQVS TFGLSLVRLD IRQESDRHTD VLDAITKHLE IGSYREWSEE RRQEWLLSEL 

       490        500        510        520        530        540 
RGKRPLFGPD LPKTEEISDV LDTFHVIAEL PADNFGAYII SMATAPSDVL AVELLQRECH 

       550        560        570        580        590        600 
VKQPLRVVPL FEKLADLEAA PAALVRLFSI DWYRNRINGI QEVMIGYSDS GKDAGRFSAA 

       610        620        630        640        650        660 
WQLYKAQEEL IKVAKQYGVK LTMFHGRGGT VGRGGGPTHL AILSQPPDTI HGSLRVTVQG 

       670        680        690        700        710        720 
EVIEKCFGEE HLCFRTLQRF TAATLEHGMH PPVSPKPEWR ALMDEMAVVA TEEYRSIVFK 

       730        740        750        760        770        780 
EPRFVEYFRL ATPEMEYGRM NIGSRPSKRK PSGGIESLRA IPWIFAWTQT RFHLPVWLGF 

       790        800        810        820        830        840 
GAAFKHIIQK DIRNLHMLQE MYNAWPFFRV TIDLVEMVFA KGDPGIAALN DKLLVSEDLW 

       850        860        870        880        890        900 
AFGEKLRADY EETKGLLLQI AGHKDLLEGD PYLKQRLRLR DSYITTLNVC QAYTLKRIRD 

       910        920        930        940        950 
PNYNVTTRPH ISKEIMESSN PADELVKLNP TSEYGPGLED TLILTMKGIA AGMQNTG

« Hide

References

« Hide 'large scale' references
[1]"The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)."
Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I., Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W., Brun A. expand/collapse author list , Brunner A., Busov V., Campbell M., Carlson J., Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M., Couturier J., Covert S., Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S.
Science 313:1596-1604(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nisqually.
[2]US DOE Joint Genome Institute (JGI-PGF)
Grigoriev I.V., Terry A., Salamov A.A., Otillar R., Lou Y., Lucas S., Hammon N., Glavina del Rio T., Detter J., Kalin E., Tice H., Pitluck S., Chapman J., Putnam N.H., Brunner A., Busov V., Campbell M., Chalot M. expand/collapse author list , Covert S., Davis J., DiFazio S., Gribskov M., Gunter L., Hamberger B., Jansson S., Joshi C., Larimer F., Martin F., Napoli C., Nelson D., Ralph S., Rombauts S., Rouze P., Schrader J., Tsai C., Vahala J., Tuskan G., Rokhsar D.
Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases
Cited for: GENOME REANNOTATION.
Strain: cv. Nisqually.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		DS017304 Genomic DNA. Translation: EEF09626.1.
RefSeqXP_002330719.1. XM_002330683.1.
UniGenePth.1931.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRING3694.estExt_Genewise1_v1.C_1460016.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7477244.
KEGGpop:POPTR_745223.

Phylogenomic databases

eggNOGCOG2352.
HOGENOMHOG000238648.
KOK01595.
ProtClustDBCLSN2679806.

Family and domain databases

HAMAPMF_00595. PEPcase_type1.
InterProIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase.
[Graphical view]
PfamPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSPR00150. PEPCARBXLASE.
SUPFAMSSF51621. Pyrv/PenolPyrv_Kinase_cat. 1 hit.
PROSITEPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB9N631_POPTR
AccessionPrimary (citable) accession number: B9N631
Entry history
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: April 3, 2013
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry info