B9N4U5 (B9N4U5_POPTR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
N-acetyl-gamma-glutamyl-phosphate reductase RuleBase RU004038
EC=1.2.1.38 RuleBase RU004038

Gene names

ORF Names:

POPTRDRAFT_267747 EMBL EEF08438.1

Organism

Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) [Complete proteome]

Taxonomic identifier

3694 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › fabids › Malpighiales › Salicaceae › Saliceae › Populus

Protein attributes

Sequence length	352 AA.
Sequence status	Fragment.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	N-acetyl-L-glutamate 5-semialdehyde + NADP+ + phosphate = N-acetyl-5-glutamyl phosphate + NADPH. RuleBase RU004038
Pathway	Amino-acid biosynthesis; L-arginine biosynthesis; N(2)-acetyl-L-ornithine from L-glutamate. RuleBase RU004258

Ontologies

Keywords
Biological process	Amino-acid biosynthesis RuleBase RU004038
Ligand	NADP RuleBase RU004038
Molecular function	Oxidoreductase RuleBase RU004038
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	arginine biosynthetic process Inferred from electronic annotation. Source: InterPro
Molecular function	N-acetyl-gamma-glutamyl-phosphate reductase activity Inferred from electronic annotation. Source: EC NAD binding Inferred from electronic annotation. Source: InterPro protein dimerization activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	1	1	EMBL EEF08438.1
	Non-terminal residue	352	1	EMBL EEF08438.1

Sequences

	Sequence		Length	Mass (Da)
	B9N4U5 [UniParc]. Last modified March 24, 2009. Version 1. Checksum: 0639258F4DDDEDED	FASTA	352	38,678
	10 20 30 40 50 60 SNAKQEKEVR VALLGASGYT GAEIIRLLAN HPYFGITVMT ADRNAGKSMD SVFPHLITQK 70 80 90 100 110 120 DLPVLVSTSD ADFSDVDAVF CCLPHGTTQE IIKGLPKGLK IVDLSADFRL RNVSEYEEWY 130 140 150 160 170 180 GQPHRAPDLQ EEAVYGLTEI LREEIKNAHL VANPGCYPTS IQLPLVPLIK ANLIEHKNII 190 200 210 220 230 240 VDAKSGVSGA GRGAKVANLY TELTEGIMSY GVTRHRHVPE IEQGLSDAAH SKVTISFTPH 250 260 270 280 290 300 LMPMTRGMQS TIYVEMASGV TTDNLYQQLK VSYQDEEFVR LLEKGAVPRT HDVRGSNYCY 310 320 330 340 350 INVFPDRIPG RAIIISVIDN LVKGASGQAL QNLNLMMGFP ENTGLGYLPL FP

References

[1]

"The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)." Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I., Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W., Brun A. , Brunner A., Busov V., Campbell M., Carlson J., Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M., Couturier J., Covert S., Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S. Science 313:1596-1604(2006) [PubMed: 16973872] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Nisqually.

Cross-references

Sequence databases
EMBL GenBank DDBJ	DS017297 Genomic DNA. Translation: EEF08438.1.
RefSeq	XP_002330272.1. XM_002330236.1.
3D structure databases
ProteinModelPortal	B9N4U5.
ModBase	Search...
Protein-protein interaction databases
STRING	B9N4U5.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7474481.
KEGG	pop:POPTR_267747.
Phylogenomic databases
GeneTree	EPGT00050000010868.
OMA	VCRIAVH.
ProtClustDB	PLN02968.
Family and domain databases
HAMAP	MF_00150. ArgC_type1. [Tree]
InterPro	IPR023013. AGPR_AS. IPR000706. AGPR_type-1. IPR016040. NAD(P)-bd_dom. IPR000534. Semialdehyde_DH_NAD-bd. IPR012280. Semialdhyde_DH_dimer_dom. [Graphical view]
Gene3D	G3DSA:3.40.50.720. NAD(P)-bd. 1 hit.
KO	K00145.
Pfam	PF01118. Semialdhyde_dh. 1 hit. PF02774. Semialdhyde_dhC. 1 hit. [Graphical view]
SMART	SM00859. Semialdhyde_dh. 1 hit. [Graphical view]
TIGRFAMs	TIGR01850. ArgC. 1 hit.
PROSITE	PS01224. ARGC. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B9N4U5_POPTR

Accession

Primary (citable) accession number: B9N4U5

Entry history

Integrated into UniProtKB/TrEMBL:	March 24, 2009
Last sequence update:	March 24, 2009
Last modified:	December 14, 2011
This is version 25 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)