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B9N294 (B9N294_POPTR) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Predicted protein EMBL EEF07582.1
Gene names
ORF Names:POPTRDRAFT_827702 EMBL EEF07582.1
OrganismPopulus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) [Complete proteome]
Taxonomic identifier3694 [NCBI]
Taxonomic lineageEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › fabids › Malpighiales › Salicaceae › Saliceae › Populus

Protein attributes

Sequence length433 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular componentmembrane

Inferred from electronic annotation. Source: InterPro

   Molecular functionacetylglucosaminyltransferase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B9N294 [UniParc].

Last modified March 24, 2009. Version 1.
Checksum: C9E2D7D1A03D5439

FASTA43349,800
        10         20         30         40         50         60 
MRKNGNSHPG RLFGDRRWLI PFFTSLLVFL ILFSSATFGV FTSSYGVEKV PFDTVSYKRP 

        70         80         90        100        110        120 
ENSNGYFVES DLKKWFNRSR YSELEPPRLA YLISGTKGDS QRMMRTLQAV YHPRNQYILH 

       130        140        150        160        170        180 
LDLEAPPRER LMLGVYVKSD LTFQEVGNVR VMAQSNLVTY KGPTMIACTL QAIAIMLRES 

       190        200        210        220        230        240 
LEWDWFINLS ASDYPLVTQD DLLHVFSNLS RNLNFIEHTR LTGWKMNSRA KPIAIDPGLY 

       250        260        270        280        290        300 
LSKKSDLSLT TQRRSLPTSF KLFTGSAWIM LTRSFLEYCI MGWENLPRTI LMYYTNFVSS 

       310        320        330        340        350        360 
PEGYFHTVIC NTEEFQDTAI GHDLHYIAWD NPPRQHPLSL TMKDFDKMVK SNAPFARKFA 

       370        380        390        400        410        420 
RDDPVLDKID KEILNRTSRF APGAWCIGSS GNGSDPCSVR GNYSQFRPGP GAERLQELLQ 

       430 
SLLSEDFRKK QCS

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References

[1]"The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)."
Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I., Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W., Brun A. expand/collapse author list , Brunner A., Busov V., Campbell M., Carlson J., Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M., Couturier J., Covert S., Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S.
Science 313:1596-1604(2006) [PubMed: 16973872] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nisqually.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		DS017285 Genomic DNA. Translation: EEF07582.1.
RefSeqXP_002329401.1. XM_002329365.1.
UniGenePth.13300.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7459384.
KEGGpop:POPTR_827702.

Phylogenomic databases

GeneTreeEPGT00050000008770.
ProtClustDBCLSN2719835.

Family and domain databases

InterProIPR003406. Glyco_trans_14.
[Graphical view]
PfamPF02485. Branch. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB9N294_POPTR
AccessionPrimary (citable) accession number: B9N294
Entry history
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: December 14, 2011
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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