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B9N1Y2 (B9N1Y2_POPTR) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 21. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Predicted protein EMBL EEF07838.1
Gene names
ORF Names:POPTRDRAFT_827793 EMBL EEF07838.1
OrganismPopulus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) [Complete proteome]
Taxonomic identifier3694 [NCBI]
Taxonomic lineageEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › fabids › Malpighiales › Salicaceae › Saliceae › Populus

Protein attributes

Sequence length495 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

metal ion binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B9N1Y2 [UniParc].

Last modified March 24, 2009. Version 1.
Checksum: CB0B028BA9E3F2EB

FASTA49552,960
        10         20         30         40         50         60 
MVTAQHPKRR VAFILIDGLG DVSLPRLGYK TPLQAANVPN LDAIASAGVN GLMDPVEVGL 

        70         80         90        100        110        120 
GCGSDTAHLS LLGYDPRVYY KGRGAFESMG AGLAMSPGDI AFKSNFATLD EETGIVTSRR 

       130        140        150        160        170        180 
ADRHFDKEGP ILCAALDGMK LPSFPEYEVR VRYATEHRCG VVVKGPRLSC NISGTDPLKD 

       190        200        210        220        230        240 
NRLILQAEAL DDTDEARHTA AVVNELSREI SRVLVSHPLN AKRAAEGKNI ANVVLLRGCG 

       250        260        270        280        290        300 
IRIEVPSFEN KHGLWPCMVA PTKIIAGLGL SLDIDILEAP GATGDYQTLL TSKATVIAKA 

       310        320        330        340        350        360 
LSAPLAPSPN VFVPGEDEHK PGRPDGYDFG FLHIKAIDDA GHDKASILKV KALEAVDRAI 

       370        380        390        400        410        420 
GQLAKLLLQA ESTGKFQYFL CVTGDHSTPV EYGDHSFEPV PFSMCRLRDF VGAVGGESII 

       430        440        450        460        470        480 
METSLDPFPL PVVKAGENLV ETESAEKERS SKQLKAFSGD SVCELSEIAA ARGCLGRFPG 

       490 
GQMMGIIKAF LELNA

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References

[1]"The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)."
Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I., Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W., Brun A. expand/collapse author list , Brunner A., Busov V., Campbell M., Carlson J., Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M., Couturier J., Covert S., Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S.
Science 313:1596-1604(2006) [PubMed: 16973872] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nisqually.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		DS017284 Genomic DNA. Translation: EEF07838.1.
RefSeqXP_002329253.1. XM_002329217.1.

3D structure databases

ProteinModelPortalB9N1Y2.
ModBaseSearch...

Protein-protein interaction databases

STRINGB9N1Y2.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsPOPTR_0017s14230.1; POPTR_0017s14230.1; POPTR_0017s14230.
GeneID7475467.
KEGGpop:POPTR_827793.

Phylogenomic databases

GeneTreeEPGT00050000019435.
OMADIAFRCN.
PhylomeDBB9N1Y2.
ProtClustDBCLSN2680262.

Family and domain databases

InterProIPR017849. Alkaline_Pase-like_a/b/a.
IPR017850. Alkaline_phosphatase_core.
IPR004456. BisP-indep_Pglycerate_Mutase.
IPR006124. Metalloenzyme.
[Graphical view]
Gene3DG3DSA:3.40.720.10. Alk_phosphtse. 2 hits.
PfamPF01676. Metalloenzyme. 2 hits.
PF10143. PhosphMutase. 1 hit.
[Graphical view]
SUPFAMSSF53649. Alkaline_phosphatase_core. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB9N1Y2_POPTR
AccessionPrimary (citable) accession number: B9N1Y2
Entry history
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: January 25, 2012
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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