B9N0P6 (B9N0P6_POPTR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Predicted protein EMBL EEE77404.1

Gene names

ORF Names:

POPTRDRAFT_596858 EMBL EEE77404.1

Organism

Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) [Reference proteome]

Taxonomic identifier

3694 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Euphyllophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › fabids › Malpighiales › Salicaceae › Saliceae › Populus

Protein attributes

Sequence length	980 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	intracellular protein transport Inferred from electronic annotation. Source: InterPro vesicle-mediated transport Inferred from electronic annotation. Source: InterPro
Cellular_component	membrane coat Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B9N0P6 [UniParc]. Last modified March 24, 2009. Version 1. Checksum: C601A30CEE5ED4E9	FASTA	980	107,185
	10 20 30 40 50 60 MEQLKTIGRE LAMGSQGGFG QSKEFLDLVK SIGEARSKAE EDRIVLREIE SLKRRIVEPG 70 80 90 100 110 120 IPKRKMKEYI IRLVYVEMLG HDASFGYIHA VKMTHDDNLV LKRTGYLAVT LFLNEDHDLI 130 140 150 160 170 180 ILIVNTIQKD LKSDNYLVVC AALNAVCKLI NEETIPAVLP QVVELLGHSK EAVRKKAIMA 190 200 210 220 230 240 LHRFYHKSPS SVSHLLSNFR KKLCDSDPGV MGATLCPLFD LITIDANSYK DLVVSFVSIL 250 260 270 280 290 300 KQVAERRLPK VYDYHQLPAP FIQIRLLKIL ALLGSGDKQA SEHMYTVVGD IFGKCDSSSN 310 320 330 340 350 360 IGNAVLYECI CCVSSIHPNP KLLEAAADVI ARFLKSDSHN LKYMGIDALG RLIKLSPEIA 370 380 390 400 410 420 EQHQLAVIDC LEDPDDTLKR KTFELLYKMT KSSNVEVIVD RMIDYMISIN DNHYKTEIAS 430 440 450 460 470 480 RCVELAEQFA PSNHWFIQTM NKVFEHAGDL VNIKVAHNLM RLIAEGFGED DDTADSQLRS 490 500 510 520 530 540 SAVESYLHII GEPKLPSVFL HVICWVLGEY GTADGKFSAS YVTGKLCDVA ESYSSDETVK 550 560 570 580 590 600 AYAVTALMKI YAFEIAAGRK LDILPECQSL IEELSASHST DLQQRAYELQ AVIGLDVRAI 610 620 630 640 650 660 GSIMPSDASC EDIEVDKCLS FLNGYVQQSL EKGAQPYIPE NERSGMVNIS NFRNQDQLEV 670 680 690 700 710 720 ASHGLRFEAY ELPKPSVQSW TPPMSVASST ELVPVPEPSY YRETPQTASV PSSSDTGPSG 730 740 750 760 770 780 LKLRLDGVQK KWGRPTYSSS SASTSNSSSL KAVNGITQVD GVSTGNSKTH ETSYDSRRPQ 790 800 810 820 830 840 VEISEEKQKL AASLFGGSSK TERRSSTGHK VAKASSHAAE KLHTPKSTAI SSADNAVEKP 850 860 870 880 890 900 NLVQPPPDLL DLGEPIVTSS APSVDPFRQL EGLLDATQVP GTLGGTKAPD FMALYAETPA 910 920 930 940 950 960 SGQSAGVSHP LSLIRDEINL VPGLSNASSN TVHGGATAAN PSQISKGPNV KDALEKDALV 970 980 RQMGVTPSGQ NPNLFKDLFG

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)." Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I., Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W., Brun A. , Brunner A., Busov V., Campbell M., Carlson J., Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M., Couturier J., Covert S., Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S. Science 313:1596-1604(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Nisqually.
[2]	US DOE Joint Genome Institute (JGI-PGF) Grigoriev I.V., Terry A., Salamov A.A., Otillar R., Lou Y., Lucas S., Hammon N., Glavina del Rio T., Detter J., Kalin E., Tice H., Pitluck S., Chapman J., Putnam N.H., Brunner A., Busov V., Campbell M., Chalot M. , Covert S., Davis J., DiFazio S., Gribskov M., Gunter L., Hamberger B., Jansson S., Joshi C., Larimer F., Martin F., Napoli C., Nelson D., Ralph S., Rombauts S., Rouze P., Schrader J., Tsai C., Vahala J., Tuskan G., Rokhsar D. Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases Cited for: GENOME REANNOTATION. Strain: cv. Nisqually.

Cross-references

Sequence databases
EMBL GenBank DDBJ	DS017278 Genomic DNA. Translation: EEE77404.1.
RefSeq	XP_002328755.1. XM_002328719.1.
UniGene	Pth.2283.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7482983.
KEGG	pop:POPTR_596858.
Phylogenomic databases
eggNOG	NOG303101.
HOGENOM	HOG000231885.
KO	K12400.
ProtClustDB	CLSN2680345.
Family and domain databases
Gene3D	1.25.10.10. 1 hit.
InterPro	IPR017109. AP4_complex_esu. IPR011989. ARM-like. IPR016024. ARM-type_fold. IPR002553. Clathrin/coatomer_adapt-like_N. [Graphical view]
PANTHER	PTHR22780:SF13. PTHR22780:SF13. 1 hit.
Pfam	PF01602. Adaptin_N. 1 hit. [Graphical view]
SUPFAM	SSF48371. ARM-type_fold. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B9N0P6_POPTR

Accession

Primary (citable) accession number: B9N0P6

Entry history

Integrated into UniProtKB/TrEMBL:	March 24, 2009
Last sequence update:	March 24, 2009
Last modified:	March 6, 2013
This is version 24 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)