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Protein

Glutamate decarboxylase

Gene

POPTR_0017s01430g

Organism
Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Catalytic activityi

L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDecarboxylaseUniRule annotation, Lyase
LigandPyridoxal phosphateUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
Gene namesi
ORF Names:POPTR_0017s01430gImported, POPTR_T059200v3Imported
OrganismiPopulus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa)Imported
Taxonomic identifieri3694 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsMalpighialesSalicaceaeSaliceaePopulus
Proteomesi
  • UP000006729 Componenti: Linkage group LGXVII

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei277N6-(pyridoxal phosphate)lysineUniRule annotation1

Interactioni

Protein-protein interaction databases

STRINGi3694.POPTR_0017s01430.1.

Structurei

3D structure databases

ProteinModelPortaliB9MX23.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili459 – 479Sequence analysisAdd BLAST21

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

InParanoidiB9MX23.
KOiK01580.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiView protein in InterPro
IPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major.
PANTHERiPTHR43321. PTHR43321. 1 hit.
PfamiView protein in Pfam
PF00282. Pyridoxal_deC. 1 hit.
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

Sequencei

Sequence statusi: Complete.

B9MX23-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVLSKTSSES DDSVHSTFAS RYVRASLPRF KMPENSIPKE AAFQIINDEL
60 70 80 90 100
MLDGNPRLNL ASFVTTWMEP ECDKLIMASI NKNYVDMDEY PVTTELQNRC
110 120 130 140 150
VNIIAHLFNA PLGDSETAIG VGTVGSSEAI MLAGLAFKRR WQNKMKAEGK
160 170 180 190 200
PYDKPNIVTG ANVQVCWEKF ARYFEVELKE VKLRDGYYVM DPEKAVKMVD
210 220 230 240 250
ENTICVAAIL GSTLNGEFED VKLLNDLLVE KNKETGWDTP IHVDAASGGF
260 270 280 290 300
IAPFIYPELE WDFRLPLVKS INVSGHKYGL VYAGIGWVVW RNKEDLPEEL
310 320 330 340 350
IFHINYLGAD QPTFTLNFSK GSSQVIAQYY QLIRLGYEGY KNVMENCRDN
360 370 380 390 400
MMVLKQGLEN TGKFNIVSKD NGVPLVAFSL KDNSSHKEFE VSEMLRRFGW
410 420 430 440 450
IVPAYTMPPD AQHVTVLRVV IREDFSRTLA ERLVLDIEKV LHELETLPCR
460 470 480 490
ISTKIALANE EKEAAANKEK RDLEKTREIT TVWRKFVMQR KMNGVC
Length:496
Mass (Da):56,385
Last modified:March 24, 2009 - v1
Checksum:i1ADF4AC5BE77C3A3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000353 Genomic DNA. Translation: ERP50213.1.
KZ623370 Genomic DNA. Translation: PNS23468.1.
RefSeqiXP_006372416.1. XM_006372354.1.

Genome annotation databases

GeneIDi18106489.
KEGGipop:POPTR_0017s01430g.

Similar proteinsi

Entry informationi

Entry nameiB9MX23_POPTR
AccessioniPrimary (citable) accession number: B9MX23
Entry historyiIntegrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: March 28, 2018
This is version 62 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported