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B9MW50 (B9MW50_POPTR) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Predicted protein EMBL EEE74131.1
Gene names
ORF Names:POPTRDRAFT_287666 EMBL EEE74131.1
OrganismPopulus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) [Complete proteome]
Taxonomic identifier3694 [NCBI]
Taxonomic lineageEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › fabids › Malpighiales › Salicaceae › Saliceae › Populus

Protein attributes

Sequence length449 AA.
Sequence statusFragment.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular componentmembrane

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL EEE74131.1
Non-terminal residue4491 EMBL EEE74131.1

Sequences

Sequence LengthMass (Da)Tools
B9MW50 [UniParc].

Last modified March 24, 2009. Version 1.
Checksum: B10097D36083C59C

FASTA44951,253
        10         20         30         40         50         60 
LSLSLFFISN KISSFPNPQN TLQISQAFIK VYVADLPRSL NYGLLDQYWS SSMPDARISS 

        70         80         90        100        110        120 
DPDHQIRPRP IKNLKFPDYP ENPLIKQYSA EYWITGDLMT SEKLKSRSFA KRVFDFNEAD 

       130        140        150        160        170        180 
VVFVPFFATL SAEMELAKGK GSFRRKEGNE DYQRQKEVVD FVRNSEAWKR SGGKDHVFVL 

       190        200        210        220        230        240 
TDPVAMWHVR AEIAPAILLV VDFGGWYRLD SKSSNGSSSD MIRHTQVSLL KDVIVPYTHL 

       250        260        270        280        290        300 
LPRFQFSENK KRNTLLYFKG AKHRHRGGIV RENLWDLLVN EPGVIMEEGF PNATGRELSI 

       310        320        330        340        350        360 
RGMRTSEFCL HPAGDTPTSC RLFDAIQSLC IPVIVSDNIE LPFEGILDYT EFSVFVAGDD 

       370        380        390        400        410        420 
ALKPTWLMDH LRSISEKQKE ELRRNMAKIQ LIYQYENGHP GGIGPISPNG AVNHIWKKIH 

       430        440 
EKLPVIKEAI VREKRKPPGV SIPLRCHCT

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References

[1]"The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)."
Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I., Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W., Brun A. expand/collapse author list , Brunner A., Busov V., Campbell M., Carlson J., Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M., Couturier J., Covert S., Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S.
Science 313:1596-1604(2006) [PubMed: 16973872] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nisqually.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		DS017270 Genomic DNA. Translation: EEE74131.1.
RefSeqXP_002327326.1. XM_002327290.1.
UniGenePth.9229.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7469697.
KEGGpop:POPTR_287666.

Phylogenomic databases

GeneTreeEPGT00050000007377.
ProtClustDBCLSN2688263.

Family and domain databases

InterProIPR004263. Exostosin.
[Graphical view]
PfamPF03016. Exostosin. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB9MW50_POPTR
AccessionPrimary (citable) accession number: B9MW50
Entry history
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: December 14, 2011
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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