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B9MQX0 (RL19_ANATD) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 23. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
50S ribosomal protein L19
Gene names
Name:rplS
Ordered Locus Names:Athe_0972
OrganismAnaerocellum thermophilum (strain DSM 6725 / Z-1320) [Complete proteome] [HAMAP]
Taxonomic identifier521460 [NCBI]
Taxonomic lineageBacteriaFirmicutesClostridiaThermoanaerobacteralesThermoanaerobacterales Family III. Incertae SedisCaldicellulosiruptor

Protein attributes

Sequence length128 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site By similarity. HAMAP MF_00402

Sequence similarities

Belongs to the ribosomal protein L19P family.

Ontologies

Keywords
   Molecular functionRibonucleoprotein
Ribosomal protein
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processtranslation

Inferred from electronic annotation. Source: InterPro

   Cellular componentribosome

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular functionstructural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 12812850S ribosomal protein L19 HAMAP MF_00402
PRO_1000193785

Sequences

Sequence LengthMass (Da)Tools
B9MQX0 [UniParc].

Last modified March 24, 2009. Version 1.
Checksum: 763C387708067D4F

FASTA12814,943
        10         20         30         40         50         60 
MDIIREIESE MLRKDIPDFK PGDTVRVYFK VIEGGRERVQ AFEGLVIKRR GKGLSETFTV 

        70         80         90        100        110        120 
RRISYGIGVE RVFPLHSPRL EKIEVIRRGK VRRAKLYYIR EKIGKAAKIK ELVQQPDKEN 


NNTEETNA 

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References

[1]"Complete sequence of chromosome of Anaerocellum thermophilum DSM 6725."
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Sims D., Meincke L., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Kataeva I., Adams M.W.W.
Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 6725 / Z-1320.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001393 Genomic DNA. Translation: ACM60074.1.
RefSeqYP_002572847.1. NC_012034.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGB9MQX0.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7407873.
GenomeReviewsGene locus Athe_0972 in contig CP001393_GR.
KEGGate:Athe_0972.
PATRIC20899043. VBIAnaThe135187_1036.

Organism-specific databases

CMRSearch...

Phylogenomic databases

OMAFPLHSPI.
ProtClustDBPRK05338.

Family and domain databases

HAMAPMF_00402. Ribosomal_L19.
[Tree]
InterProIPR001857. Ribosomal_L19.
IPR018257. Ribosomal_L19_CS.
IPR008991. Translation_prot_SH3-like.
[Graphical view]
KOK02884.
PANTHERPTHR15680. Ribosomal_L19. 1 hit.
PfamPF01245. Ribosomal_L19. 1 hit.
[Graphical view]
PIRSFPIRSF002191. Ribosomal_L19. 1 hit.
PRINTSPR00061. RIBOSOMALL19.
SUPFAMSSF50104. Transl_SH3_like. 1 hit.
TIGRFAMsTIGR01024. RplS_bact. 1 hit.
PROSITEPS01015. RIBOSOMAL_L19. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameRL19_ANATD
AccessionPrimary (citable) accession number: B9MQX0
Entry history
Integrated into UniProtKB/Swiss-Prot: July 28, 2009
Last sequence update: March 24, 2009
Last modified: January 25, 2012
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Ribosomal proteins

Ribosomal proteins families and list of entries

SIMILARITY comments

Index of protein domains and families