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B9MQB5 (B9MQB5_CALBD) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 42. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length325 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + L-tryptophan + tRNA(Trp) = AMP + diphosphate + L-tryptophyl-tRNA(Trp). SAAS SAAS024109 HAMAP-Rule MF_00140

Subunit structure

Homodimer By similarity. HAMAP-Rule MF_00140

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00140.

Sequence similarities

Belongs to the class-I aminoacyl-tRNA synthetase family. RuleBase RU003489 HAMAP-Rule MF_00140

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Motif10 – 189"HIGH" region By similarity HAMAP-Rule MF_00140
Motif193 – 1975"KMSKS" region By similarity HAMAP-Rule MF_00140

Sites

Binding site1961ATP By similarity HAMAP-Rule MF_00140

Sequences

Sequence LengthMass (Da)Tools
B9MQB5 [UniParc].

Last modified March 24, 2009. Version 1.
Checksum: 9E1E03ADC42467AC

FASTA32537,305
        10         20         30         40         50         60 
MRRVLSGTRP TGILHLGNYF GAIESWVKLQ DEYECFFFVA DWHALTTGYE DTSNLREYTK 

        70         80         90        100        110        120 
QVVIDLLACG LDPKKCTIFV QSHVPQHAEL HLLFSMIMPL SWLYRCPTYK DQMRELKERN 

       130        140        150        160        170        180 
IATYGFLGYP CLQAADILIY KAELVPVGED QLPHLELTRE IARRFNFLYG QTFPEPQAIL 

       190        200        210        220        230        240 
NTVKVLVGTD GRKMSKSYGN TIALSEDLES VRKKVMNMVT DPARIRKNDP GHPEVCTVFA 

       250        260        270        280        290        300 
YHQIFSPETV SETEEDCRQG KIGCVECKKR LFENISRFLE PIQSKRRELE NDLDYVLGVI 

       310        320 
NEGARKAREI ASRTLQEAKD RAGLL 

« Hide

References

[1]"Complete sequence of chromosome of Anaerocellum thermophilum DSM 6725."
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Sims D., Meincke L., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Kataeva I., Adams M.W.W.
Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-1888 / DSM 6725 / Z-1320.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001393 Genomic DNA. Translation: ACM59907.1.
RefSeqYP_002572680.1. NC_012034.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING521460.Athe_0792.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACM59907; ACM59907; Athe_0792.
GeneID7407979.
KEGGate:Athe_0792.
PATRIC20898655. VBIAnaThe135187_0844.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0180.
HOGENOMHOG000059941.
KOK01867.
OrthoDBEOG686NJQ.

Enzyme and pathway databases

BioCycCBES521460:GH8H-809-MONOMER.

Family and domain databases

Gene3D3.40.50.620. 1 hit.
HAMAPMF_00140_B. Trp_tRNA_synth_B.
InterProIPR001412. aa-tRNA-synth_I_CS.
IPR002305. aa-tRNA-synth_Ic.
IPR014729. Rossmann-like_a/b/a_fold.
IPR002306. Trp-tRNA-ligase.
IPR024109. Trp-tRNA-ligase_bac-type.
[Graphical view]
PANTHERPTHR10055. PTHR10055. 1 hit.
PfamPF00579. tRNA-synt_1b. 1 hit.
[Graphical view]
PRINTSPR01039. TRNASYNTHTRP.
TIGRFAMsTIGR00233. trpS. 1 hit.
PROSITEPS00178. AA_TRNA_LIGASE_I. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB9MQB5_CALBD
AccessionPrimary (citable) accession number: B9MQB5
Entry history
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: June 11, 2014
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)