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B9MQ85

- GATB_CALBD

UniProt

B9MQ85 - GATB_CALBD

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Protein

Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B

Gene

gatB

Organism
Caldicellulosiruptor bescii (strain ATCC BAA-1888 / DSM 6725 / Z-1320) (Anaerocellum thermophilum)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln).UniRule annotation

Catalytic activityi

ATP + L-glutamyl-tRNA(Gln) + L-glutamine = ADP + phosphate + L-glutaminyl-tRNA(Gln) + L-glutamate.UniRule annotation
ATP + L-aspartyl-tRNA(Asn) + L-glutamine = ADP + phosphate + L-asparaginyl-tRNA(Asn) + L-glutamate.UniRule annotation

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. carbon-nitrogen ligase activity, with glutamine as amido-N-donor Source: InterPro

GO - Biological processi

  1. translation Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Ligase

Keywords - Biological processi

Protein biosynthesis

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciCBES521460:GH8H-779-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit BUniRule annotation (EC:6.3.5.-UniRule annotation)
Short name:
Asp/Glu-ADT subunit BUniRule annotation
Gene namesi
Name:gatBUniRule annotation
Ordered Locus Names:Athe_0762
OrganismiCaldicellulosiruptor bescii (strain ATCC BAA-1888 / DSM 6725 / Z-1320) (Anaerocellum thermophilum)
Taxonomic identifieri521460 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaThermoanaerobacteralesThermoanaerobacterales Family III. Incertae SedisCaldicellulosiruptor
ProteomesiUP000007723: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 480480Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit BPRO_1000122503Add
BLAST

Interactioni

Subunit structurei

Heterotrimer of A, B and C subunits.UniRule annotation

Protein-protein interaction databases

STRINGi521460.Athe_0762.

Structurei

3D structure databases

ProteinModelPortaliB9MQ85.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the GatB/GatE family. GatB subfamily.UniRule annotation

Phylogenomic databases

eggNOGiCOG0064.
HOGENOMiHOG000223742.
KOiK02434.
OrthoDBiEOG6RJV5B.

Family and domain databases

Gene3Di1.10.10.410. 1 hit.
HAMAPiMF_00121. GatB.
InterProiIPR004413. Apn/Gln-ADT_bsu.
IPR017959. Asn/Gln-tRNA_amidoTrfase_suB/E.
IPR006075. Asn/Gln-tRNA_Trfase_suB/E_cat.
IPR018027. Asn/Gln_amidotransferase.
IPR003789. Asn/Gln_tRNA_amidoTrfrase-rel.
IPR023168. GatB_Yqey_C.
IPR017958. Gln-tRNA_amidoTrfase_suB_CS.
[Graphical view]
PANTHERiPTHR11659. PTHR11659. 1 hit.
PfamiPF02934. GatB_N. 1 hit.
PF02637. GatB_Yqey. 1 hit.
[Graphical view]
SMARTiSM00845. GatB_Yqey. 1 hit.
[Graphical view]
SUPFAMiSSF89095. SSF89095. 1 hit.
TIGRFAMsiTIGR00133. gatB. 1 hit.
PROSITEiPS01234. GATB. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B9MQ85-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MEYEVVIGLE VHAELATKSK IFCSCTTEFG GEPNTHCCPI CTGMPGVLPV
60 70 80 90 100
LNKKAVEYAI MAGLATNCQI ARYSKQDRKN YFYPDLPKAY QISQYDLPLC
110 120 130 140 150
YNGYIDIEVN GQKKRIGIKR IHIEEDAGKL LHDQWEEGSL VDFNRCGVPL
160 170 180 190 200
IEIVTEPDLR SSEETRIFLE KLKAILQYTE VSDCKMQEGS LRVDVNLSVR
210 220 230 240 250
PKGSKEFGTR TEMKNLNSFR SVVRAIEYEA RRQIEVLESG GVVVQETRRW
260 270 280 290 300
DDPKGISLSM RTKEEAHDYR YFPEPDLPPI VVDDSWIEEI RKRIPELPDQ
310 320 330 340 350
KKERYIKEYG LPEYDAGVLT SSKAIANYFE ECIKYTQNIK AASNWMMGEI
360 370 380 390 400
MRILNDKGLE PEEINNIKIK PNQLASLINL VDNKTISNTI AKQVFEEMFE
410 420 430 440 450
TGKDPEVIVK EKGLVQITDR NVILEAVKQA IANNPKSVED YKNGKDKAFG
460 470 480
FLVGQVMKIT KGKANPQLVN EILREELEKI
Length:480
Mass (Da):54,776
Last modified:March 24, 2009 - v1
Checksum:i2A3BD0019AEEF92C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001393 Genomic DNA. Translation: ACM59877.1.
RefSeqiYP_002572650.1. NC_012034.1.

Genome annotation databases

EnsemblBacteriaiACM59877; ACM59877; Athe_0762.
GeneIDi7407949.
KEGGiate:Athe_0762.
PATRICi20898593. VBIAnaThe135187_0813.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001393 Genomic DNA. Translation: ACM59877.1 .
RefSeqi YP_002572650.1. NC_012034.1.

3D structure databases

ProteinModelPortali B9MQ85.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 521460.Athe_0762.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACM59877 ; ACM59877 ; Athe_0762 .
GeneIDi 7407949.
KEGGi ate:Athe_0762.
PATRICi 20898593. VBIAnaThe135187_0813.

Phylogenomic databases

eggNOGi COG0064.
HOGENOMi HOG000223742.
KOi K02434.
OrthoDBi EOG6RJV5B.

Enzyme and pathway databases

BioCyci CBES521460:GH8H-779-MONOMER.

Family and domain databases

Gene3Di 1.10.10.410. 1 hit.
HAMAPi MF_00121. GatB.
InterProi IPR004413. Apn/Gln-ADT_bsu.
IPR017959. Asn/Gln-tRNA_amidoTrfase_suB/E.
IPR006075. Asn/Gln-tRNA_Trfase_suB/E_cat.
IPR018027. Asn/Gln_amidotransferase.
IPR003789. Asn/Gln_tRNA_amidoTrfrase-rel.
IPR023168. GatB_Yqey_C.
IPR017958. Gln-tRNA_amidoTrfase_suB_CS.
[Graphical view ]
PANTHERi PTHR11659. PTHR11659. 1 hit.
Pfami PF02934. GatB_N. 1 hit.
PF02637. GatB_Yqey. 1 hit.
[Graphical view ]
SMARTi SM00845. GatB_Yqey. 1 hit.
[Graphical view ]
SUPFAMi SSF89095. SSF89095. 1 hit.
TIGRFAMsi TIGR00133. gatB. 1 hit.
PROSITEi PS01234. GATB. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of chromosome of Anaerocellum thermophilum DSM 6725."
    Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Sims D., Meincke L., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Kataeva I., Adams M.W.W.
    Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-1888 / DSM 6725 / Z-1320.

Entry informationi

Entry nameiGATB_CALBD
AccessioniPrimary (citable) accession number: B9MQ85
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 28, 2009
Last sequence update: March 24, 2009
Last modified: November 26, 2014
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3