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B9MQ85

- GATB_CALBD

UniProt

B9MQ85 - GATB_CALBD

Protein

Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B

Gene

gatB

Organism
Caldicellulosiruptor bescii (strain ATCC BAA-1888 / DSM 6725 / Z-1320) (Anaerocellum thermophilum)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 42 (01 Oct 2014)
      Sequence version 1 (24 Mar 2009)
      Previous versions | rss
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    Functioni

    Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln).UniRule annotation

    Catalytic activityi

    ATP + L-glutamyl-tRNA(Gln) + L-glutamine = ADP + phosphate + L-glutaminyl-tRNA(Gln) + L-glutamate.UniRule annotation
    ATP + L-aspartyl-tRNA(Asn) + L-glutamine = ADP + phosphate + L-asparaginyl-tRNA(Asn) + L-glutamate.UniRule annotation

    GO - Molecular functioni

    1. ATP binding Source: UniProtKB-KW
    2. carbon-nitrogen ligase activity, with glutamine as amido-N-donor Source: InterPro

    GO - Biological processi

    1. translation Source: UniProtKB-KW

    Keywords - Molecular functioni

    Ligase

    Keywords - Biological processi

    Protein biosynthesis

    Keywords - Ligandi

    ATP-binding, Nucleotide-binding

    Enzyme and pathway databases

    BioCyciCBES521460:GH8H-779-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit BUniRule annotation (EC:6.3.5.-UniRule annotation)
    Short name:
    Asp/Glu-ADT subunit BUniRule annotation
    Gene namesi
    Name:gatBUniRule annotation
    Ordered Locus Names:Athe_0762
    OrganismiCaldicellulosiruptor bescii (strain ATCC BAA-1888 / DSM 6725 / Z-1320) (Anaerocellum thermophilum)
    Taxonomic identifieri521460 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesClostridiaThermoanaerobacteralesThermoanaerobacterales Family III. Incertae SedisCaldicellulosiruptor
    ProteomesiUP000007723: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 480480Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit BPRO_1000122503Add
    BLAST

    Interactioni

    Subunit structurei

    Heterotrimer of A, B and C subunits.UniRule annotation

    Protein-protein interaction databases

    STRINGi521460.Athe_0762.

    Structurei

    3D structure databases

    ProteinModelPortaliB9MQ85.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the GatB/GatE family. GatB subfamily.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0064.
    HOGENOMiHOG000223742.
    KOiK02434.
    OrthoDBiEOG6RJV5B.

    Family and domain databases

    Gene3Di1.10.10.410. 1 hit.
    HAMAPiMF_00121. GatB.
    InterProiIPR004413. Apn/Gln-ADT_bsu.
    IPR017959. Asn/Gln-tRNA_amidoTrfase_suB/E.
    IPR006075. Asn/Gln-tRNA_Trfase_suB/E_cat.
    IPR018027. Asn/Gln_amidotransferase.
    IPR003789. Asn/Gln_tRNA_amidoTrfrase-rel.
    IPR023168. GatB_Yqey_C.
    IPR017958. Gln-tRNA_amidoTrfase_suB_CS.
    [Graphical view]
    PANTHERiPTHR11659. PTHR11659. 1 hit.
    PfamiPF02934. GatB_N. 1 hit.
    PF02637. GatB_Yqey. 1 hit.
    [Graphical view]
    SMARTiSM00845. GatB_Yqey. 1 hit.
    [Graphical view]
    SUPFAMiSSF89095. SSF89095. 1 hit.
    TIGRFAMsiTIGR00133. gatB. 1 hit.
    PROSITEiPS01234. GATB. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    B9MQ85-1 [UniParc]FASTAAdd to Basket

    « Hide

    MEYEVVIGLE VHAELATKSK IFCSCTTEFG GEPNTHCCPI CTGMPGVLPV    50
    LNKKAVEYAI MAGLATNCQI ARYSKQDRKN YFYPDLPKAY QISQYDLPLC 100
    YNGYIDIEVN GQKKRIGIKR IHIEEDAGKL LHDQWEEGSL VDFNRCGVPL 150
    IEIVTEPDLR SSEETRIFLE KLKAILQYTE VSDCKMQEGS LRVDVNLSVR 200
    PKGSKEFGTR TEMKNLNSFR SVVRAIEYEA RRQIEVLESG GVVVQETRRW 250
    DDPKGISLSM RTKEEAHDYR YFPEPDLPPI VVDDSWIEEI RKRIPELPDQ 300
    KKERYIKEYG LPEYDAGVLT SSKAIANYFE ECIKYTQNIK AASNWMMGEI 350
    MRILNDKGLE PEEINNIKIK PNQLASLINL VDNKTISNTI AKQVFEEMFE 400
    TGKDPEVIVK EKGLVQITDR NVILEAVKQA IANNPKSVED YKNGKDKAFG 450
    FLVGQVMKIT KGKANPQLVN EILREELEKI 480
    Length:480
    Mass (Da):54,776
    Last modified:March 24, 2009 - v1
    Checksum:i2A3BD0019AEEF92C
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001393 Genomic DNA. Translation: ACM59877.1.
    RefSeqiWP_015907315.1. NC_012034.1.
    YP_002572650.1. NC_012034.1.

    Genome annotation databases

    EnsemblBacteriaiACM59877; ACM59877; Athe_0762.
    GeneIDi7407949.
    KEGGiate:Athe_0762.
    PATRICi20898593. VBIAnaThe135187_0813.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001393 Genomic DNA. Translation: ACM59877.1 .
    RefSeqi WP_015907315.1. NC_012034.1.
    YP_002572650.1. NC_012034.1.

    3D structure databases

    ProteinModelPortali B9MQ85.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 521460.Athe_0762.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACM59877 ; ACM59877 ; Athe_0762 .
    GeneIDi 7407949.
    KEGGi ate:Athe_0762.
    PATRICi 20898593. VBIAnaThe135187_0813.

    Phylogenomic databases

    eggNOGi COG0064.
    HOGENOMi HOG000223742.
    KOi K02434.
    OrthoDBi EOG6RJV5B.

    Enzyme and pathway databases

    BioCyci CBES521460:GH8H-779-MONOMER.

    Family and domain databases

    Gene3Di 1.10.10.410. 1 hit.
    HAMAPi MF_00121. GatB.
    InterProi IPR004413. Apn/Gln-ADT_bsu.
    IPR017959. Asn/Gln-tRNA_amidoTrfase_suB/E.
    IPR006075. Asn/Gln-tRNA_Trfase_suB/E_cat.
    IPR018027. Asn/Gln_amidotransferase.
    IPR003789. Asn/Gln_tRNA_amidoTrfrase-rel.
    IPR023168. GatB_Yqey_C.
    IPR017958. Gln-tRNA_amidoTrfase_suB_CS.
    [Graphical view ]
    PANTHERi PTHR11659. PTHR11659. 1 hit.
    Pfami PF02934. GatB_N. 1 hit.
    PF02637. GatB_Yqey. 1 hit.
    [Graphical view ]
    SMARTi SM00845. GatB_Yqey. 1 hit.
    [Graphical view ]
    SUPFAMi SSF89095. SSF89095. 1 hit.
    TIGRFAMsi TIGR00133. gatB. 1 hit.
    PROSITEi PS01234. GATB. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of chromosome of Anaerocellum thermophilum DSM 6725."
      Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Sims D., Meincke L., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Kataeva I., Adams M.W.W.
      Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC BAA-1888 / DSM 6725 / Z-1320.

    Entry informationi

    Entry nameiGATB_CALBD
    AccessioniPrimary (citable) accession number: B9MQ85
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: July 28, 2009
    Last sequence update: March 24, 2009
    Last modified: October 1, 2014
    This is version 42 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3