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B9MB71 (B9MB71_ACIET) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 43. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Elongation factor Tu HAMAP-Rule MF_00118

Short name=EF-Tu HAMAP-Rule MF_00118
Gene names
Name:tuf HAMAP-Rule MF_00118
Ordered Locus Names:Dtpsy_0271 EMBL ACM31755.1, Dtpsy_3253 EMBL ACM34682.1
OrganismAcidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)) [Complete proteome] [HAMAP] EMBL ACM31755.1
Taxonomic identifier535289 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeAcidovorax

Protein attributes

Sequence length396 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity. RuleBase RU000325 HAMAP-Rule MF_00118

Subunit structure

Monomer By similarity. HAMAP-Rule MF_00118

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00118.

Sequence similarities

Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily. RuleBase RU000325 HAMAP-Rule MF_00118

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding19 – 268GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding81 – 855GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding136 – 1394GTP By similarity HAMAP-Rule MF_00118

Sequences

Sequence LengthMass (Da)Tools
B9MB71 [UniParc].

Last modified March 24, 2009. Version 1.
Checksum: 79638198C3C534AC

FASTA39643,261
        10         20         30         40         50         60 
MAKGKFERTK PHVNVGTIGH VDHGKTTLTA AIATVLSKKF GGEAKGYDQI DNAPEEKARG 

        70         80         90        100        110        120 
ITINTSHVEY ETATRHYAHV DCPGHADYVK NMITGAAQMD GAILVCSAAD GPMPQTREHI 

       130        140        150        160        170        180 
LLARQVGVPY IIVFLNKCDM VDDEELLELV EMEVRELLDK YDFPGDDTPI IRGSAKLALE 

       190        200        210        220        230        240 
GDQSDKGEPA IMRLAEALDT YIPTPERAVD GAFLMPVEDV FSISGRGTVV TGRVERGIIK 

       250        260        270        280        290        300 
VGEEIEIVGI RDTQKTTVTG VEMFRKLLDQ GQAGDNVGLL LRGTKREDVE RGQVLCKPGS 

       310        320        330        340        350        360 
IKPHTHFTAE VYVLSKDEGG RHTPFFNNYR PQFYFRTTDV TGSIELPADK EMVMPGDNVS 

       370        380        390 
ITVKLINPIA MEEGLRFAIR EGGRTVGAGV VAKIIA 

« Hide

References

« Hide 'large scale' references
[1]"Complete sequence of Diaphorobacter sp. TPSY."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Coates J.D.
Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: TPSY EMBL ACM31755.1.
[2]"Completed genome sequence of the anaerobic iron-oxidizing bacterium Acidovorax ebreus strain TPSY."
Byrne-Bailey K.G., Weber K.A., Chair A.H., Bose S., Knox T., Spanbauer T.L., Chertkov O., Coates J.D.
J. Bacteriol. 192:1475-1476(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: TPSY EMBL ACM31755.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001392 Genomic DNA. Translation: ACM31755.1.
CP001392 Genomic DNA. Translation: ACM34682.1.
RefSeqYP_002551755.1. NC_011992.1.
YP_002554682.1. NC_011992.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING535289.Dtpsy_3253.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACM31755; ACM31755; Dtpsy_0271.
ACM34682; ACM34682; Dtpsy_3253.
GeneID7383803.
7383855.
KEGGdia:Dtpsy_0271.
dia:Dtpsy_3253.
PATRIC21777534. VBIDiaSp55748_0284.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0050.
HOGENOMHOG000229290.
KOK02358.
OMAERKPHIN.
OrthoDBEOG6R5C6X.

Enzyme and pathway databases

BioCycAEBR535289:GHOO-271-MONOMER.
AEBR535289:GHOO-3309-MONOMER.

Family and domain databases

Gene3D3.40.50.300. 1 hit.
HAMAPMF_00118_B. EF_Tu_B.
InterProIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSPR00315. ELONGATNFCT.
SUPFAMSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB9MB71_ACIET
AccessionPrimary (citable) accession number: B9MB71
Entry history
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: June 11, 2014
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)