B9MB71 (B9MB71_ACIET) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Elongation factor Tu HAMAP-Rule MF_00118
Short name=EF-Tu HAMAP-Rule MF_00118

Gene names

Name:	tuf HAMAP-Rule MF_00118
Ordered Locus Names:	Dtpsy_0271 EMBL ACM31755.1, Dtpsy_3253 EMBL ACM34682.1

Organism

Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)) [Complete proteome] [HAMAP] EMBL ACM31755.1

Taxonomic identifier

535289 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Comamonadaceae › Acidovorax › Acidovorax ebreus

Protein attributes

Sequence length	396 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity. RuleBase RU000325 HAMAP-Rule MF_00118
Subunit structure	Monomer By similarity. HAMAP-Rule MF_00118
Subcellular location	Cytoplasm By similarity HAMAP-Rule MF_00118.
Sequence similarities	Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily. RuleBase RU000325 HAMAP-Rule MF_00118

Ontologies

Keywords
Biological process	Protein biosynthesis
Cellular component	Cytoplasm HAMAP-Rule MF_00118
Ligand	GTP-binding RuleBase RU000323 HAMAP-Rule MF_00118 Nucleotide-binding
Molecular function	Elongation factor RuleBase RU000325 HAMAP-Rule MF_00118 EMBL ACM31755.1
Technical term	Complete proteome
Gene Ontology (GO)
Cellular_component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular_function	GTP binding Inferred from electronic annotation. Source: UniProtKB-HAMAP GTPase activity Inferred from electronic annotation. Source: InterPro translation elongation factor activity Inferred from electronic annotation. Source: UniProtKB-HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Regions
	Nucleotide binding	19 – 26	8	GTP By similarity HAMAP-Rule MF_00118
	Nucleotide binding	81 – 85	5	GTP By similarity HAMAP-Rule MF_00118
	Nucleotide binding	136 – 139	4	GTP By similarity HAMAP-Rule MF_00118

Sequences

	Sequence		Length	Mass (Da)
	B9MB71 [UniParc]. Last modified March 24, 2009. Version 1. Checksum: 79638198C3C534AC	FASTA	396	43,261
	10 20 30 40 50 60 MAKGKFERTK PHVNVGTIGH VDHGKTTLTA AIATVLSKKF GGEAKGYDQI DNAPEEKARG 70 80 90 100 110 120 ITINTSHVEY ETATRHYAHV DCPGHADYVK NMITGAAQMD GAILVCSAAD GPMPQTREHI 130 140 150 160 170 180 LLARQVGVPY IIVFLNKCDM VDDEELLELV EMEVRELLDK YDFPGDDTPI IRGSAKLALE 190 200 210 220 230 240 GDQSDKGEPA IMRLAEALDT YIPTPERAVD GAFLMPVEDV FSISGRGTVV TGRVERGIIK 250 260 270 280 290 300 VGEEIEIVGI RDTQKTTVTG VEMFRKLLDQ GQAGDNVGLL LRGTKREDVE RGQVLCKPGS 310 320 330 340 350 360 IKPHTHFTAE VYVLSKDEGG RHTPFFNNYR PQFYFRTTDV TGSIELPADK EMVMPGDNVS 370 380 390 ITVKLINPIA MEEGLRFAIR EGGRTVGAGV VAKIIA

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Complete sequence of Diaphorobacter sp. TPSY." US DOE Joint Genome Institute Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Coates J.D. Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: TPSY EMBL ACM31755.1.
[2]	"Completed genome sequence of the anaerobic iron-oxidizing bacterium Acidovorax ebreus strain TPSY." Byrne-Bailey K.G., Weber K.A., Chair A.H., Bose S., Knox T., Spanbauer T.L., Chertkov O., Coates J.D. J. Bacteriol. 192:1475-1476(2010) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: TPSY EMBL ACM31755.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001392 Genomic DNA. Translation: ACM31755.1. CP001392 Genomic DNA. Translation: ACM34682.1.
RefSeq	YP_002551755.1. NC_011992.1. YP_002554682.1. NC_011992.1.
3D structure databases
ModBase	Search...
MobiDB	Search...
Protein-protein interaction databases
STRING	535289.Dtpsy_3253.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACM31755; ACM31755; Dtpsy_0271. ACM34682; ACM34682; Dtpsy_3253.
GeneID	7383803. 7383855.
KEGG	dia:Dtpsy_0271. dia:Dtpsy_3253.
PATRIC	21777534. VBIDiaSp55748_0284.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0050.
HOGENOM	HOG000229290.
KO	K02358.
OMA	VTPHTEF.
OrthoDB	EOG6R5C6X.
ProtClustDB	PRK00049.
Enzyme and pathway databases
BioCyc	AEBR535289:GHOO-271-MONOMER. AEBR535289:GHOO-3309-MONOMER.
Family and domain databases
Gene3D	3.40.50.300. 1 hit.
HAMAP	MF_00118_B. EF_Tu_B.
InterPro	IPR000795. EF_GTP-bd_dom. IPR027417. P-loop_NTPase. IPR005225. Small_GTP-bd_dom. IPR009000. Transl_B-barrel. IPR009001. Transl_elong_EF1A/Init_IF2_C. IPR004161. Transl_elong_EFTu/EF1A_2. IPR004541. Transl_elong_EFTu/EF1A_bac/org. IPR004160. Transl_elong_EFTu/EF1A_C. [Graphical view]
Pfam	PF00009. GTP_EFTU. 1 hit. PF03144. GTP_EFTU_D2. 1 hit. PF03143. GTP_EFTU_D3. 1 hit. [Graphical view]
PRINTS	PR00315. ELONGATNFCT.
SUPFAM	SSF50447. SSF50447. 1 hit. SSF50465. SSF50465. 1 hit. SSF52540. SSF52540. 1 hit.
TIGRFAMs	TIGR00485. EF-Tu. 1 hit. TIGR00231. small_GTP. 1 hit.
PROSITE	PS00301. EFACTOR_GTP. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B9MB71_ACIET

Accession

Primary (citable) accession number: B9MB71

Entry history

Integrated into UniProtKB/TrEMBL:	March 24, 2009
Last sequence update:	March 24, 2009
Last modified:	April 16, 2014
This is version 41 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)