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B9M3T6 (B9M3T6_GEODF) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length1114 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
B9M3T6 [UniParc].

Last modified March 24, 2009. Version 1.
Checksum: B384BC999D8266D9

FASTA1,114129,039
        10         20         30         40         50         60 
MTGLKDEPLL WYKDAVIYEV HVRSFYDSNG DGIGDFRGLL KKLPFLHDLG VTAVWILPFY 

        70         80         90        100        110        120 
PSPLKDDGYD IADYYRIHPD YGTLGDFQAV LREAHRLGIR IITELVLNHT SDQHAWFQKS 

       130        140        150        160        170        180 
RRGGPRSVWR DFYVWSDTPA KYQDARVIFK DFESSNWSWD PVAKAYFWHR FYSHQPDLNY 

       190        200        210        220        230        240 
DNPRVHEAML QVLDFWLGMG VDGLRLDAVP YLYEREGTNC ENLPETYAFL NKIRQFMDEK 

       250        260        270        280        290        300 
YPGRMLLAEA NQWPEDAVSY LGSGACHMAF HFPLMPRMFM ALQMEESFPI INILEQTPGI 

       310        320        330        340        350        360 
SEHSQWALFL RNHDELTLEM VTDEERDYMY RVYASDPRAR INLGIRRRLA PLMGSDRRKI 

       370        380        390        400        410        420 
ELMNVLLFSL PGTPIIYYGD EIGMGDNYYL GDRNGVRTPM QWSPDRNAGF SAANAQRLFL 

       430        440        450        460        470        480 
PVIIDPEYHY EAVNVENHTR NPSSLLWWMR RLIDLRKQYK AFSRGSLEFV RLRNPKVIAM 

       490        500        510        520        530        540 
IRKFEEETIL IFINLSRFSQ VVEIASPEFL GHVPEDIFSR NRFPVIKDSP YVLILGPYNY 

       550        560        570        580        590        600 
HLLLMSKAQE AEAPAAEYVC PELSVSGSWE NILRRSGLAQ MERRVLPGYL RKTRWFRSKG 

       610        620        630        640        650        660 
QTISKLIIGD SLPVPADNTS FFLSFIETAY TEGQTETYLL PLHYLPLTEG EEILQEYPEA 

       670        680        690        700        710        720 
VIARLKVNNE DGILYDAMYS SIFRHVIFGL IAGRKRIEGS EGRVLSGRPG HSFAAIFREK 

       730        740        750        760        770        780 
KAPLQSRVGK VEQSNTAVHF DESFFFKLYR RVEEGVNPEV EIGRFLTEKD RFAHVAPLVG 

       790        800        810        820        830        840 
VLEYWQKGTE PITLGIMQGL VENQGDAWGL TMDEVGEYVE RVLASKEDMK VTPRLPANIY 

       850        860        870        880        890        900 
DADHGALSPK MQELMGGFYL EMVPLLGKRT AQLHLALSAH SKYPAFTPEP FSIFNQRSRF 

       910        920        930        940        950        960 
QSMRNRVRTV FDLLKRNLKN LKDEIRQEAE HLLLLEQEII KKLGKFTGRR FSAMKTRIHG 

       970        980        990       1000       1010       1020 
DYHLGQVLYT GQDFIIIDFE GEPARSMRER RIKDSPLRDV AGMINSFQYA AYAVLVQHAH 

      1030       1040       1050       1060       1070       1080 
IRTEDIPFLE PWAEAWYRYV AGTFLHAYLQ NVKGAQFIPS LEADVQTILD IYILDKAIHD 

      1090       1100       1110 
LGYEINNRPD WLLIPLRAIQ RLMKNADQAE EMVK 

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References

[1]"Complete sequence of Geobacter sp. FRC-32."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Saunders E., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Kostka J., Richardson P.
Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 22248 / JCM 15807 / FRC-32.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001390 Genomic DNA. Translation: ACM19579.1.
RefSeqYP_002536680.1. NC_011979.1.

3D structure databases

ProteinModelPortalB9M3T6.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING316067.Geob_1219.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACM19579; ACM19579; Geob_1219.
GeneID7363040.
KEGGgeo:Geob_1219.
PATRIC22008950. VBIGeoSp137169_1249.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0366.
HOGENOMHOG000268420.
KOK05343.
OrthoDBEOG6RVFV2.

Enzyme and pathway databases

BioCycGSP316067:GHSV-1232-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProIPR002575. Aminoglycoside_PTrfase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR011009. Kinase-like_dom.
IPR012810. TreS/a-amylase_N.
IPR012811. TreS_maltokin_C_dom.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
PF01636. APH. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 2 hits.
SSF56112. SSF56112. 2 hits.
TIGRFAMsTIGR02457. TreS_Cterm. 1 hit.
TIGR02456. treS_nterm. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB9M3T6_GEODF
AccessionPrimary (citable) accession number: B9M3T6
Entry history
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: May 14, 2014
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)