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Protein

Superoxide dismutase [Cu-Zn]

Gene

Geob_1155

Organism
Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

Cofactori

Protein has several cofactor binding sites:
  • Cu cationUniRule annotationNote: Binds 1 copper ion per subunit.UniRule annotation
  • Zn2+UniRule annotationNote: Binds 1 zinc ion per subunit.UniRule annotation

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotation

Keywords - Ligandi

CopperUniRule annotation, Metal-bindingUniRule annotation, ZincUniRule annotation

Enzyme and pathway databases

BioCyciGSP316067:GHSV-1165-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutase [Cu-Zn]UniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:Geob_1155Imported
OrganismiGeobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32)Imported
Taxonomic identifieri316067 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfuromonadalesGeobacteraceaeGeobacter
ProteomesiUP000007721 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi316067.Geob_1155.

Structurei

3D structure databases

ProteinModelPortaliB9M3A5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the Cu-Zn superoxide dismutase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG2032.
HOGENOMiHOG000263448.
KOiK04565.
OMAiPYGLVFT.
OrthoDBiEOG6K13RS.

Family and domain databases

Gene3Di2.60.40.200. 1 hit.
InterProiIPR018152. SOD_Cu/Zn_BS.
IPR001424. SOD_Cu_Zn_dom.
[Graphical view]
PfamiPF00080. Sod_Cu. 1 hit.
[Graphical view]
PRINTSiPR00068. CUZNDISMTASE.
SUPFAMiSSF49329. SSF49329. 1 hit.
PROSITEiPS00332. SOD_CU_ZN_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B9M3A5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIRSTICLLL IASATVAGAG ETGKTVSSSI VDTTGKSVGT ATFAEKKGGV
60 70 80 90 100
EVTIKASGLP PGKHGMHIHE NGKCEPPGFA TAGAHFNPTG RHHGAGHPEG
110 120 130 140 150
KHAGDLPNLE VKKDGTAKLT ATAEGATLGK GKTSLLKNGG TALIIHAKPD
160 170
DEKTDPTGNS GDRIACGVVG AR
Length:172
Mass (Da):17,232
Last modified:March 24, 2009 - v1
Checksum:i9B3CBCB2A81C3699
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001390 Genomic DNA. Translation: ACM19515.1.
RefSeqiWP_012646244.1. NC_011979.1.

Genome annotation databases

EnsemblBacteriaiACM19515; ACM19515; Geob_1155.
KEGGigeo:Geob_1155.
PATRICi22008808. VBIGeoSp137169_1181.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001390 Genomic DNA. Translation: ACM19515.1.
RefSeqiWP_012646244.1. NC_011979.1.

3D structure databases

ProteinModelPortaliB9M3A5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi316067.Geob_1155.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACM19515; ACM19515; Geob_1155.
KEGGigeo:Geob_1155.
PATRICi22008808. VBIGeoSp137169_1181.

Phylogenomic databases

eggNOGiCOG2032.
HOGENOMiHOG000263448.
KOiK04565.
OMAiPYGLVFT.
OrthoDBiEOG6K13RS.

Enzyme and pathway databases

BioCyciGSP316067:GHSV-1165-MONOMER.

Family and domain databases

Gene3Di2.60.40.200. 1 hit.
InterProiIPR018152. SOD_Cu/Zn_BS.
IPR001424. SOD_Cu_Zn_dom.
[Graphical view]
PfamiPF00080. Sod_Cu. 1 hit.
[Graphical view]
PRINTSiPR00068. CUZNDISMTASE.
SUPFAMiSSF49329. SSF49329. 1 hit.
PROSITEiPS00332. SOD_CU_ZN_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 22248 / JCM 15807 / FRC-32Imported.

Entry informationi

Entry nameiB9M3A5_GEODF
AccessioniPrimary (citable) accession number: B9M3A5
Entry historyi
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: July 22, 2015
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.