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B9M3A1

- B9M3A1_GEODF

UniProt

B9M3A1 - B9M3A1_GEODF

Protein
Submitted name:

Pyridoxal-5'-phosphate-dependent decarboxylase

Gene

Geob_1151

Organism
Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 37 (01 Oct 2014)
      Sequence version 1 (24 Mar 2009)
      Previous versions | rss
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    Functioni

    Cofactori

    Pyridoxal phosphate.UniRule annotation

    GO - Molecular functioni

    1. carboxy-lyase activity Source: InterPro
    2. pyridoxal phosphate binding Source: InterPro

    GO - Biological processi

    1. carboxylic acid metabolic process Source: InterPro

    Keywords - Molecular functioni

    LyaseUniRule annotation

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Enzyme and pathway databases

    BioCyciGSP316067:GHSV-1161-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Pyridoxal-5'-phosphate-dependent decarboxylaseImported
    Gene namesi
    Ordered Locus Names:Geob_1151Imported
    OrganismiGeobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32)Imported
    Taxonomic identifieri316067 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfuromonadalesGeobacteraceaeGeobacter
    ProteomesiUP000007721: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi316067.Geob_1151.

    Structurei

    3D structure databases

    ProteinModelPortaliB9M3A1.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the group II decarboxylase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0076.
    HOGENOMiHOG000282553.
    KOiK01580.
    OrthoDBiEOG6MSRZP.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProiIPR022517. Asp_decarboxylase_pyridox.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view]
    PfamiPF00282. Pyridoxal_deC. 1 hit.
    [Graphical view]
    SUPFAMiSSF53383. SSF53383. 1 hit.
    TIGRFAMsiTIGR03799. NOD_PanD_pyr. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    B9M3A1-1 [UniParc]FASTAAdd to Basket

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    MLKNREAARA NLENLYRIFT VPEAPDSTLG AIDQAIAADV TGFLQTHIVA    50
    IERDLEAIEA DFASAIIPEE PTYVSEYTEF VKENLVAQSV HTAAPGFVGH 100
    MTSAIPYFML PLARLMTALN QNLVKVETSK AFTPMERQVL AMLHHLVYRR 150
    DADFYPAWIH NSQHALGAFC SGGTIANVTA LWVARNRLFA PSADFGGLAQ 200
    EGLGRALQHR GAEGIAVLVS ERGHYSFGKA ADLLGLGRDN LIKVQTDAHN 250
    RVDLKLLREE VRRLQDRNIL PLALVGIAGT TETGNVDPLE ALADLAGELG 300
    CHFHVDAAWG GPTLFSDRFR SLLSGIERAD SVTIDAHKQL YVPMGAGMVV 350
    FKDPTALSAI EHHANYILRH GSKDLGSHTL EGSRPGMAML VHAGLSIIGR 400
    KGYELLMDMG IERARTFAAM IRQYPDFELT SEPELNILTY RYCPLNVQKA 450
    LAAAPAEQRA GINALLDQVC QLLQKHQREA GKTFVSRTRL RVARHDEELT 500
    VLRVVLANPL TTDEILAAVL AEQCEIVQQP EIQGLLQQVE EICTGLTAKA 550
    ADQSPN 556
    Length:556
    Mass (Da):60,908
    Last modified:March 24, 2009 - v1
    Checksum:i0238BBFE25959B0D
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001390 Genomic DNA. Translation: ACM19511.1.
    RefSeqiYP_002536612.1. NC_011979.1.

    Genome annotation databases

    EnsemblBacteriaiACM19511; ACM19511; Geob_1151.
    GeneIDi7364258.
    KEGGigeo:Geob_1151.
    PATRICi22008798. VBIGeoSp137169_1176.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001390 Genomic DNA. Translation: ACM19511.1 .
    RefSeqi YP_002536612.1. NC_011979.1.

    3D structure databases

    ProteinModelPortali B9M3A1.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 316067.Geob_1151.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACM19511 ; ACM19511 ; Geob_1151 .
    GeneIDi 7364258.
    KEGGi geo:Geob_1151.
    PATRICi 22008798. VBIGeoSp137169_1176.

    Phylogenomic databases

    eggNOGi COG0076.
    HOGENOMi HOG000282553.
    KOi K01580.
    OrthoDBi EOG6MSRZP.

    Enzyme and pathway databases

    BioCyci GSP316067:GHSV-1161-MONOMER.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProi IPR022517. Asp_decarboxylase_pyridox.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view ]
    Pfami PF00282. Pyridoxal_deC. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53383. SSF53383. 1 hit.
    TIGRFAMsi TIGR03799. NOD_PanD_pyr. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DSM 22248 / JCM 15807 / FRC-32Imported.

    Entry informationi

    Entry nameiB9M3A1_GEODF
    AccessioniPrimary (citable) accession number: B9M3A1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 24, 2009
    Last sequence update: March 24, 2009
    Last modified: October 1, 2014
    This is version 37 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3