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B9M2J2 (GLGA_GEODF) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 34. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Glycogen synthase

EC=2.4.1.21
Alternative name(s):
Starch [bacterial glycogen] synthase
Gene names
Name:glgA
Ordered Locus Names:Geob_1010
OrganismGeobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) [Complete proteome] [HAMAP]
Taxonomic identifier316067 [NCBI]
Taxonomic lineageBacteriaProteobacteriaDeltaproteobacteriaDesulfuromonadalesGeobacteraceaeGeobacter

Protein attributes

Sequence length484 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Synthesizes alpha-1,4-glucan chains using ADP-glucose By similarity. HAMAP-Rule MF_00484

Catalytic activity

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP-Rule MF_00484

Pathway

Glycan biosynthesis; glycogen biosynthesis. HAMAP-Rule MF_00484

Sequence similarities

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.

Ontologies

Keywords
   Biological processGlycogen biosynthesis
   Molecular functionGlycosyltransferase
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processglycogen biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Molecular_functionstarch synthase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 484484Glycogen synthase HAMAP-Rule MF_00484
PRO_1000135651

Sites

Binding site151ADP-glucose By similarity

Sequences

Sequence LengthMass (Da)Tools
B9M2J2 [UniParc].

Last modified March 24, 2009. Version 1.
Checksum: AED5043041F56AF6

FASTA48453,926
        10         20         30         40         50         60 
MKILFVASEV TPFAKSGGLA DVTGALPKSL KKQGHDVRII LPFYSEVERG GYGIRKGRKS 

        70         80         90        100        110        120 
VDVMIGGSVK RGLFRHTNLE DIPVYLLENK EYFSRDHLYG TASGEYPDNH LRFAFFCRGV 

       130        140        150        160        170        180 
LDLLKKMDYR PDIIHCHDWQ TAMIPLILKK EKGDDLFFSK TGTVFTIHNL AYQGLFPKEA 

       190        200        210        220        230        240 
MVDMGLDPSL FTIDCLEYYG KVNLIKGAIL TADVINTVSE TYCREILTPE SGDGLDGVLT 

       250        260        270        280        290        300 
LRKNDLYGVL NGIDYEHWNP ATDRGISKNF TPGAPAGKAA NKKALQKRLG LEIAEDIPLV 

       310        320        330        340        350        360 
GMVSRLTEQK GLDLLEALLP RIAKAKLQLV LLGTGDEKYL KLLQEFAALG TDNVSVNIGF 

       370        380        390        400        410        420 
HPELAPQIYA GSDIFLMPSR YEPCGLGQMI ALRYGAVPVV RKTGGLADTI FDERDQPKEP 

       430        440        450        460        470        480 
NGFSFDEYTP EALWEALSRA VEAYSDKAAW KKMMKRGMAG DFSWNTSALK YEELYRLVLA 


KKGR 

« Hide

References

[1]"Complete sequence of Geobacter sp. FRC-32."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Saunders E., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Kostka J., Richardson P.
Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 22248 / JCM 15807 / FRC-32.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001390 Genomic DNA. Translation: ACM19371.1.
RefSeqYP_002536472.1. NC_011979.1.

3D structure databases

ProteinModelPortalB9M2J2.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING316067.Geob_1010.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACM19371; ACM19371; Geob_1010.
GeneID7363731.
KEGGgeo:Geob_1010.
PATRIC22008505. VBIGeoSp137169_1030.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0297.
HOGENOMHOG000294940.
KOK00703.
OMACRLTEQK.
OrthoDBEOG6JTC6Z.
ProtClustDBCLSK829188.

Enzyme and pathway databases

BioCycGSP316067:GHSV-1020-MONOMER.
UniPathwayUPA00164.

Family and domain databases

HAMAPMF_00484. Glycogen_synth.
InterProIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsTIGR02095. glgA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameGLGA_GEODF
AccessionPrimary (citable) accession number: B9M2J2
Entry history
Integrated into UniProtKB/Swiss-Prot: July 28, 2009
Last sequence update: March 24, 2009
Last modified: February 19, 2014
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways