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B9LRF1

- SYR_HALLT

UniProt

B9LRF1 - SYR_HALLT

Protein

Arginine--tRNA ligase

Gene

argS

Organism
Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 34 (01 Oct 2014)
      Sequence version 1 (24 Mar 2009)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-tRNA(Arg).UniRule annotation

    GO - Molecular functioni

    1. arginine-tRNA ligase activity Source: UniProtKB-HAMAP
    2. ATP binding Source: UniProtKB-HAMAP

    GO - Biological processi

    1. arginyl-tRNA aminoacylation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Aminoacyl-tRNA synthetase, Ligase

    Keywords - Biological processi

    Protein biosynthesis

    Keywords - Ligandi

    ATP-binding, Nucleotide-binding

    Enzyme and pathway databases

    BioCyciHLAC416348:GIWW-179-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Arginine--tRNA ligaseUniRule annotation (EC:6.1.1.19UniRule annotation)
    Alternative name(s):
    Arginyl-tRNA synthetaseUniRule annotation
    Short name:
    ArgRSUniRule annotation
    Gene namesi
    Name:argSUniRule annotation
    Ordered Locus Names:Hlac_0169
    OrganismiHalorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34)
    Taxonomic identifieri416348 [NCBI]
    Taxonomic lineageiArchaeaEuryarchaeotaHalobacteriaHalobacterialesHalobacteriaceaeHalorubrum
    ProteomesiUP000000740: Chromosome 1

    Subcellular locationi

    Cytoplasm UniRule annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cytoplasm

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 602602Arginine--tRNA ligasePRO_1000198942Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi416348.Hlac_0169.

    Structurei

    3D structure databases

    ProteinModelPortaliB9LRF1.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Motif

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Motifi124 – 13411"HIGH" regionAdd
    BLAST

    Sequence similaritiesi

    Belongs to the class-I aminoacyl-tRNA synthetase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0018.
    HOGENOMiHOG000247213.
    KOiK01887.
    OMAiMEHMGFG.

    Family and domain databases

    Gene3Di1.10.730.10. 1 hit.
    3.30.1360.70. 1 hit.
    3.40.50.620. 1 hit.
    HAMAPiMF_00123. Arg_tRNA_synth.
    InterProiIPR001278. Arg-tRNA-ligase.
    IPR005148. Arg-tRNA-synth_N.
    IPR008909. DALR_anticod-bd.
    IPR014729. Rossmann-like_a/b/a_fold.
    IPR009080. tRNAsynth_1a_anticodon-bd.
    [Graphical view]
    PANTHERiPTHR11956. PTHR11956. 1 hit.
    PfamiPF03485. Arg_tRNA_synt_N. 1 hit.
    PF05746. DALR_1. 1 hit.
    PF00750. tRNA-synt_1d. 1 hit.
    [Graphical view]
    PRINTSiPR01038. TRNASYNTHARG.
    SMARTiSM01016. Arg_tRNA_synt_N. 1 hit.
    SM00836. DALR_1. 1 hit.
    [Graphical view]
    SUPFAMiSSF47323. SSF47323. 1 hit.
    SSF55190. SSF55190. 1 hit.
    TIGRFAMsiTIGR00456. argS. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    B9LRF1-1 [UniParc]FASTAAdd to Basket

    « Hide

    MFRQFRSEVA DALGDALASL DLPTDDLGIE RPPDDMDATL ASSVAFRLAG    50
    EVGDAPPNVA ATVADAVDVD GYDYLAAVDT AGPYVNFHPG ERYFVDTLDA 100
    SAVDSGYGAL PDRDTSVVVE HTSANPTGPV HVGRARNPIV GDAVANLLEY 150
    AGYDVDRHYY VNDAGRQMAV FTWAYERFDE SDLAGEPARA RAEYDLVRYY 200
    RKGNAYLEEA DPEAVEAAEE EIAAILQGLE AGDEETYERV GEVVDTVLGG 250
    MKECLARLPA EFDEFVKETR FMRDGSTDDI AARLKETDHA VYEEDAWQLE 300
    LDDWGIDKNL VFLRSDDTSL YTTRDLAHHE WKFDNYDRAV TVLGEDHKLQ 350
    ADQLDATLEL LGNDIDRLGH VIYSYVNLPD GKMSTRRGTG VMLDDLLDEA 400
    IDRAREAVET RMDDRIRDDD LTEEDVERIA HEVGIGAVRY DIVSKQPAKA 450
    ITFEWEDALD FEGQSAPFVQ YVHARCCGIL DEAADAGIEV PGVTADSEGV 500
    VDVGALDVDA TVFETDAARD LLREVARFPA AIESAADDLE PHTIATFTRE 550
    FADAYNAFYR ECPVVTSDDE ELRAARVALV AAAKHTMANA LDVLGVEAPE 600
    SM 602
    Length:602
    Mass (Da):66,200
    Last modified:March 24, 2009 - v1
    Checksum:i618E820646F93457
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001365 Genomic DNA. Translation: ACM55774.1.
    RefSeqiWP_012659416.1. NC_012029.1.
    YP_002564844.1. NC_012029.1.

    Genome annotation databases

    EnsemblBacteriaiACM55774; ACM55774; Hlac_0169.
    GeneIDi7402098.
    KEGGihla:Hlac_0169.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001365 Genomic DNA. Translation: ACM55774.1 .
    RefSeqi WP_012659416.1. NC_012029.1.
    YP_002564844.1. NC_012029.1.

    3D structure databases

    ProteinModelPortali B9LRF1.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 416348.Hlac_0169.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACM55774 ; ACM55774 ; Hlac_0169 .
    GeneIDi 7402098.
    KEGGi hla:Hlac_0169.

    Phylogenomic databases

    eggNOGi COG0018.
    HOGENOMi HOG000247213.
    KOi K01887.
    OMAi MEHMGFG.

    Enzyme and pathway databases

    BioCyci HLAC416348:GIWW-179-MONOMER.

    Family and domain databases

    Gene3Di 1.10.730.10. 1 hit.
    3.30.1360.70. 1 hit.
    3.40.50.620. 1 hit.
    HAMAPi MF_00123. Arg_tRNA_synth.
    InterProi IPR001278. Arg-tRNA-ligase.
    IPR005148. Arg-tRNA-synth_N.
    IPR008909. DALR_anticod-bd.
    IPR014729. Rossmann-like_a/b/a_fold.
    IPR009080. tRNAsynth_1a_anticodon-bd.
    [Graphical view ]
    PANTHERi PTHR11956. PTHR11956. 1 hit.
    Pfami PF03485. Arg_tRNA_synt_N. 1 hit.
    PF05746. DALR_1. 1 hit.
    PF00750. tRNA-synt_1d. 1 hit.
    [Graphical view ]
    PRINTSi PR01038. TRNASYNTHARG.
    SMARTi SM01016. Arg_tRNA_synt_N. 1 hit.
    SM00836. DALR_1. 1 hit.
    [Graphical view ]
    SUPFAMi SSF47323. SSF47323. 1 hit.
    SSF55190. SSF55190. 1 hit.
    TIGRFAMsi TIGR00456. argS. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of chromosome1 of Halorubrum lacusprofundi ATCC 49239."
      US DOE Joint Genome Institute
      Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Sims D., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Ivanova N.
      , Anderson I., DasSarma S., Cavicchioli R., Richardson P.
      Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34.

    Entry informationi

    Entry nameiSYR_HALLT
    AccessioniPrimary (citable) accession number: B9LRF1
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: July 28, 2009
    Last sequence update: March 24, 2009
    Last modified: October 1, 2014
    This is version 34 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Aminoacyl-tRNA synthetases
      List of aminoacyl-tRNA synthetase entries
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3