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B9LPN6 (B9LPN6_HALLT) Unreviewed, UniProtKB/TrEMBL

Last modified November 16, 2011. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
HhH-GPD family protein EMBL ACM57324.1
Gene names
Ordered Locus Names:Hlac_1742
OrganismHalorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) [Complete proteome] [HAMAP]
Taxonomic identifier416348 [NCBI]
Taxonomic lineageArchaea › Euryarchaeota › Halobacteria › Halobacteriales › Halobacteriaceae › Halorubrum

Protein attributes

Sequence length198 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processbase-excision repair

Inferred from electronic annotation. Source: InterPro

   Molecular functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B9LPN6 [UniParc].

Last modified March 24, 2009. Version 1.
Checksum: 58B6F1AB1B6F9768

FASTA19821,799
        10         20         30         40         50         60 
MNERVAATLR EDSTMARLID RHGRLTIEPA ADEFARLCTS IVNQQLSTAS AAAIHERFVD 

        70         80         90        100        110        120 
VLGGAPTPDD VLAADEVALR EAGLSGTKVE YLREAAAAFR DGDRDLTREG FGDASDEAVV 

       130        140        150        160        170        180 
AALTEIRGVG EWTARMYLIF ALGREDVLPL GDLAVRKGIE QVYNDGAELT RAEMRNIGDA 

       190 
WRPYRSYGTR YVWAEYES

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References

[1]"Complete sequence of chromosome1 of Halorubrum lacusprofundi ATCC 49239."
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Sims D., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Ivanova N. expand/collapse author list , Anderson I., DasSarma S., Cavicchioli R., Richardson P.
Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001365 Genomic DNA. Translation: ACM57324.1.
RefSeqYP_002566394.1. NC_012029.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGB9LPN6.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7400500.
GenomeReviewsGene locus Hlac_1742 in contig CP001365_GR.
KEGGhla:Hlac_1742.

Organism-specific databases

CMRSearch...

Phylogenomic databases

OMAKGIGNWT.
ProtClustDBCLSK2808841.

Family and domain databases

InterProIPR011257. DNA_glycosylase.
IPR003265. HhH-GPD_domain.
IPR023170. HTH_base_excis_C.
[Graphical view]
Gene3DG3DSA:1.10.340.30. DNA_glycosylase. 1 hit.
G3DSA:1.10.1670.10. HTH_base_excis_C. 1 hit.
KOK01247.
PfamPF00730. HhH-GPD. 1 hit.
[Graphical view]
SMARTSM00478. ENDO3c. 1 hit.
[Graphical view]
SUPFAMSSF48150. DNA_glycsylse. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB9LPN6_HALLT
AccessionPrimary (citable) accession number: B9LPN6
Entry history
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: November 16, 2011
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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