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B9LMH0

- RNP3_HALLT

UniProt

B9LMH0 - RNP3_HALLT

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Protein
Ribonuclease P protein component 3
Gene
rnp3, Hlac_0960
Organism
Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends By similarity.UniRule annotation

Catalytic activityi

Endonucleolytic cleavage of RNA, removing 5'-extranucleotides from tRNA precursor.UniRule annotation

GO - Molecular functioni

  1. ribonuclease P activity Source: UniProtKB-HAMAP
Complete GO annotation...

GO - Biological processi

  1. tRNA 5'-leader removal Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Endonuclease, Hydrolase, Nuclease

Keywords - Biological processi

tRNA processing

Enzyme and pathway databases

BioCyciHLAC416348:GIWW-982-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Ribonuclease P protein component 3 (EC:3.1.26.5)
Short name:
RNase P component 3
Alternative name(s):
Rpp30
Gene namesi
Name:rnp3
Ordered Locus Names:Hlac_0960
OrganismiHalorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34)
Taxonomic identifieri416348 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaHalobacteriaHalobacterialesHalobacteriaceaeHalorubrum
ProteomesiUP000000740: Chromosome 1

Subcellular locationi

Cytoplasm By similarity UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
  2. ribonuclease P complex Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 240240Ribonuclease P protein component 3UniRule annotation
PRO_1000148371Add
BLAST

Interactioni

Subunit structurei

Consists of a catalytic RNA component and at least 4-5 protein subunits Reviewed prediction.

Protein-protein interaction databases

STRINGi416348.Hlac_0960.

Structurei

3D structure databases

ProteinModelPortaliB9LMH0.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG1603.
HOGENOMiHOG000229552.
KOiK03539.
OMAiESFIAPG.

Family and domain databases

HAMAPiMF_00756. RNase_P_3.
InterProiIPR016195. Pol/histidinol_Pase-like.
IPR023539. RNase_P_comp-3_arc.
IPR002738. RNase_P_p30.
[Graphical view]
PfamiPF01876. RNase_P_p30. 1 hit.
[Graphical view]
SUPFAMiSSF89550. SSF89550. 1 hit.

Sequencei

Sequence statusi: Complete.

B9LMH0-1 [UniParc]FASTAAdd to Basket

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MYEAVHAHPD GDATVARHAA TAERYGYEGI VVRTREALDP ASKSSEHADE    50
ATALRDEYGI DVVDAVEIDA DNATSASGAV GNYRSDRTVV CVVGGDDGLN 100
RFAVEEPRVD VLVRPMGGGD FNHVLAKAAR DNGVHVEFDL GPLFRATGGK 150
RVRALADLRK LREIVTYYDT PHVVSANPRS HLDLRAPREV VAAAEAVGFD 200
AEWVREGLRA WGEIATRNRE RRSEAFIEPG VRRGRYEEDG 240
Length:240
Mass (Da):26,250
Last modified:March 24, 2009 - v1
Checksum:i584853D680DC45B7
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001365 Genomic DNA. Translation: ACM56558.1.
RefSeqiYP_002565628.1. NC_012029.1.

Genome annotation databases

EnsemblBacteriaiACM56558; ACM56558; Hlac_0960.
GeneIDi7401854.
KEGGihla:Hlac_0960.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001365 Genomic DNA. Translation: ACM56558.1 .
RefSeqi YP_002565628.1. NC_012029.1.

3D structure databases

ProteinModelPortali B9LMH0.
ModBasei Search...

Protein-protein interaction databases

STRINGi 416348.Hlac_0960.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACM56558 ; ACM56558 ; Hlac_0960 .
GeneIDi 7401854.
KEGGi hla:Hlac_0960.

Phylogenomic databases

eggNOGi COG1603.
HOGENOMi HOG000229552.
KOi K03539.
OMAi ESFIAPG.

Enzyme and pathway databases

BioCyci HLAC416348:GIWW-982-MONOMER.

Family and domain databases

HAMAPi MF_00756. RNase_P_3.
InterProi IPR016195. Pol/histidinol_Pase-like.
IPR023539. RNase_P_comp-3_arc.
IPR002738. RNase_P_p30.
[Graphical view ]
Pfami PF01876. RNase_P_p30. 1 hit.
[Graphical view ]
SUPFAMi SSF89550. SSF89550. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of chromosome1 of Halorubrum lacusprofundi ATCC 49239."
    US DOE Joint Genome Institute
    Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Sims D., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Ivanova N.
    , Anderson I., DasSarma S., Cavicchioli R., Richardson P.
    Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34.

Entry informationi

Entry nameiRNP3_HALLT
AccessioniPrimary (citable) accession number: B9LMH0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 28, 2009
Last sequence update: March 24, 2009
Last modified: July 9, 2014
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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