B9LKC9 (B9LKC9_CHLSY) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Deoxyribose-phosphate aldolase EMBL ACM52186.1
EC=4.1.2.4 EMBL ACM52186.1

Gene names

Ordered Locus Names:

Chy400_0756

Organism

Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) [Complete proteome] [HAMAP] EMBL ACM52186.1

Taxonomic identifier

480224 [NCBI]

Taxonomic lineage

Bacteria › Chloroflexi › Chloroflexales › Chloroflexaceae › Chloroflexus

Protein attributes

Sequence length	263 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5-phosphate By similarity. SAAS SAAS022979
Catalytic activity	2-deoxy-D-ribose 5-phosphate = D-glyceraldehyde 3-phosphate + acetaldehyde. SAAS SAAS022979
Pathway	Carbohydrate degradation; 2-deoxy-D-ribose 1-phosphate degradation; D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-alpha-D-ribose 1-phosphate: step 2/2. SAAS SAAS022979
Subcellular location	Cytoplasm By similarity SAAS SAAS022979.

Ontologies

Keywords
Cellular component	Cytoplasm SAAS SAAS022979
Ligand	Schiff base SAAS SAAS022979
Molecular function	Lyase SAAS SAAS022979 EMBL ACM52186.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	deoxyribonucleotide catabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	deoxyribose-phosphate aldolase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B9LKC9 [UniParc]. Last modified March 24, 2009. Version 1. Checksum: 09F07D8796DE14A2	FASTA	263	27,458
	10 20 30 40 50 60 MEDLIAQVRS HIDALVGLPV GTPLAHPPVP PASDTPIASF IDHTLLKPEA TVDQIDRLCS 70 80 90 100 110 120 EAERYRFASV CVNPRYVERC ARALSGSAVR VCTVIGFPLG ATTTKVKVFE TVQAIGHGAR 130 140 150 160 170 180 EVDMVLAIGA LRGREYHAVV DDIRAVTDAA HASGVLVKVI LETGLLTDFE KVMACMLAVR 190 200 210 220 230 240 AGADFVKTST GFGPGGATVA DIRLMRAAVG PTIGVKASGG VRSLAMAQEL IAAGATRIGT 250 260 SAGVAIVQEA EGTNLEPRNS DTY

References

[1]

"Complete sequence of Chloroflexus sp. Y-400-fl." Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Sims D., Kiss H., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N. , Ovchinnikova G., Bryant D.A., Richardson P. Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 29364 / DSM 637 / Y-400-fl.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001364 Genomic DNA. Translation: ACM52186.1.
RefSeq	YP_002568511.1. NC_012032.1.
3D structure databases
ProteinModelPortal	B9LKC9.
SMR	B9LKC9. Positions 35-252.
ModBase	Search...
Protein-protein interaction databases
STRING	B9LKC9.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7405896.
GenomeReviews	Gene locus Chy400_0756 in contig CP001364_GR.
KEGG	chl:Chy400_0756.
PATRIC	21420945. VBIChlSp61043_0786.
Organism-specific databases
CMR	Search...
Phylogenomic databases
OMA	IDHTNLK.
ProtClustDB	CLSK2476708.
Family and domain databases
HAMAP	MF_00114. DeoC_type1. [Tree]
InterPro	IPR013785. Aldolase_TIM. IPR011343. DeoC. IPR002915. DeoC/AroFGH_arch. IPR022979. Deoxyribose_phosphate_aldo_1. [Graphical view]
Gene3D	G3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
KO	K01619.
PANTHER	PTHR10889. DeoC. 1 hit.
Pfam	PF01791. DeoC. 1 hit. [Graphical view]
PIRSF	PIRSF001357. DeoC. 1 hit.
TIGRFAMs	TIGR00126. DeoC. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B9LKC9_CHLSY

Accession

Primary (citable) accession number: B9LKC9

Entry history

Integrated into UniProtKB/TrEMBL:	March 24, 2009
Last sequence update:	March 24, 2009
Last modified:	December 14, 2011
This is version 22 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)